Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL035410.1-201ENST00000427409 427 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 NIPA2P5-201ENST00000452282 464 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.32□□□□□ -1.88
CCNA1P78396 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.32□□□□□ -1.88
CCNA1P78396 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.32□□□□□ -1.88
CCNA1P78396 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.32□□□□□ -1.88
CCNA1P78396 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.32□□□□□ -1.88
CCNA1P78396 DNAJC8P1-201ENST00000554535 372 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.32□□□□□ -1.88
CCNA1P78396 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.32□□□□□ -1.88
CCNA1P78396 MIR3945-201ENST00000581853 98 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.32□□□□□ -1.88
CCNA1P78396 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.32□□□□□ -1.88
CCNA1P78396 AC040174.2-201ENST00000602701 465 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 AC055876.5-201ENST00000605667 259 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 AC004832.5-201ENST00000608677 401 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 AC009570.1-201ENST00000609599 745 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCNA1P78396 AL049780.3-201ENST00000624612 1583 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 MTND5P24-201ENST00000438892 1767 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 AC004972.1-201ENST00000623934 2209 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 MAPK10-322ENST00000641485 4530 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
CCNA1P78396 AP002907.1-201ENST00000606361 1430 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 SNORA1.3-201ENST00000384676 136 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 MIR196B-201ENST00000384852 84 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
CCNA1P78396 AC008173.1-201ENST00000418901 264 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.31□□□□□ -1.88
CCNA1P78396 ZFAND6P1-201ENST00000434138 605 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.31□□□□□ -1.88
CCNA1P78396 RPL23AP16-201ENST00000441715 421 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.31□□□□□ -1.88
CCNA1P78396 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNA1P78396 SNORD109B-201ENST00000458961 67 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 RNA5SP310-201ENST00000459084 116 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 SNORD109A-201ENST00000459128 67 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 AC108729.2-201ENST00000476543 840 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 RPL30P14-201ENST00000482744 348 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNA1P78396 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNA1P78396 AC114781.4-201ENST00000513707 639 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 AC104027.1-201ENST00000521887 300 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 AC126177.3-201ENST00000551839 688 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNA1P78396 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNA1P78396 AC023824.3-201ENST00000569003 562 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.31□□□□□ -1.88
CCNA1P78396 AC106028.5-201ENST00000610332 395 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 AL138880.2-201ENST00000616214 239 ntBASIC3.31□□□□□ -1.88
CCNA1P78396 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNA1P78396 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNA1P78396 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNA1P78396 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNA1P78396 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNA1P78396 AC111188.2-201ENST00000529697 1387 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 AC008432.1-201ENST00000615912 1320 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CCNA1P78396 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNA1P78396 RNU6-1027P-201ENST00000383998 107 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 AL031679.1-201ENST00000400616 525 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 RNA5SP38-201ENST00000410750 119 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 SSXP9-201ENST00000417503 292 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 AC245291.1-201ENST00000419501 328 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 VN1R42P-201ENST00000424651 344 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 AL590762.3-201ENST00000436372 640 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 HMGB3P6-201ENST00000444896 598 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.3□□□□□ -1.88
CCNA1P78396 SNORA64.4-201ENST00000516632 81 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 RN7SKP282-201ENST00000516824 299 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 SNORA76.2-201ENST00000517095 137 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 ARL2BPP5-201ENST00000523141 481 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.3□□□□□ -1.88
CCNA1P78396 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNA1P78396 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.3□□□□□ -1.88
CCNA1P78396 OSBPL9P3-201ENST00000534523 595 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNA1P78396 AC008507.1-201ENST00000587506 734 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNA1P78396 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNA1P78396 AC096947.1-201ENST00000603233 470 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 AC106791.2-201ENST00000604680 391 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 AC010149.2-201ENST00000637608 315 ntBASIC3.3□□□□□ -1.88
CCNA1P78396 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCNA1P78396 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCNA1P78396 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.29□□□□□ -1.88
CCNA1P78396 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.29□□□□□ -1.88
CCNA1P78396 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCNA1P78396 RNU5D-1-201ENST00000363299 116 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 RNU6-173P-201ENST00000364215 104 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCNA1P78396 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CCNA1P78396 AL360182.1-201ENST00000397433 468 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 NPM1P10-201ENST00000398310 865 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 RPS4XP3-201ENST00000398541 413 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.29□□□□□ -1.88
CCNA1P78396 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.29□□□□□ -1.88
CCNA1P78396 ATG3P1-201ENST00000419507 911 ntBASIC3.29□□□□□ -1.88
CCNA1P78396 AC006960.1-201ENST00000419980 153 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms