Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNA5SP341-201ENST00000516261 117 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AC018630.1-201ENST00000541376 925 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AC126177.3-201ENST00000551839 688 ntBASIC2.84□□□□□ -1.95
TPM4P67936 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.84□□□□□ -1.95
TPM4P67936 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.84□□□□□ -1.95
TPM4P67936 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.84□□□□□ -1.95
TPM4P67936 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.84□□□□□ -1.95
TPM4P67936 AC012493.2-201ENST00000595083 291 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AC125494.3-201ENST00000602759 455 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AC079880.2-201ENST00000603790 1213 ntBASIC2.84□□□□□ -1.95
TPM4P67936 HSPE1P7-201ENST00000604681 321 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AC245389.1-201ENST00000605141 529 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AL109618.2-201ENST00000605527 211 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AC011890.2-201ENST00000613393 294 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AL731566.2-201ENST00000618971 317 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AC092608.3-201ENST00000625017 386 ntBASIC2.84□□□□□ -1.95
TPM4P67936 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.84□□□□□ -1.95
TPM4P67936 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.84□□□□□ -1.95
TPM4P67936 BX649567.1-201ENST00000642071 1134 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AC026241.1-201ENST00000517873 2142 ntBASIC2.84□□□□□ -1.96
TPM4P67936 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TPM4P67936 RNU1-112P-201ENST00000364401 164 ntBASIC2.83□□□□□ -1.96
TPM4P67936 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.83□□□□□ -1.96
TPM4P67936 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.83□□□□□ -1.96
TPM4P67936 RNU6-444P-201ENST00000383988 108 ntBASIC2.83□□□□□ -1.96
TPM4P67936 RNU6-1074P-201ENST00000383995 104 ntBASIC2.83□□□□□ -1.96
TPM4P67936 SNORA18.3-201ENST00000384122 132 ntBASIC2.83□□□□□ -1.96
TPM4P67936 RNU6-441P-201ENST00000384545 106 ntBASIC2.83□□□□□ -1.96
TPM4P67936 MTND4LP20-201ENST00000402379 270 ntBASIC2.83□□□□□ -1.96
TPM4P67936 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.83□□□□□ -1.96
TPM4P67936 AC099677.1-201ENST00000420575 175 ntBASIC2.83□□□□□ -1.96
TPM4P67936 MTCO2P17-201ENST00000424336 677 ntBASIC2.83□□□□□ -1.96
TPM4P67936 AC096632.1-201ENST00000427395 310 ntBASIC2.83□□□□□ -1.96
TPM4P67936 YME1L1P1-201ENST00000429435 297 ntBASIC2.83□□□□□ -1.96
TPM4P67936 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.83□□□□□ -1.96
TPM4P67936 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.83□□□□□ -1.96
TPM4P67936 AL359385.1-201ENST00000456509 365 ntBASIC2.83□□□□□ -1.96
TPM4P67936 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.83□□□□□ -1.96
TPM4P67936 AC026427.2-201ENST00000506228 536 ntBASIC2.83□□□□□ -1.96
TPM4P67936 MTND3P24-201ENST00000506306 329 ntBASIC2.83□□□□□ -1.96
TPM4P67936 MLLT10P2-201ENST00000506434 249 ntBASIC2.83□□□□□ -1.96
TPM4P67936 HIGD1AP13-201ENST00000509878 289 ntBASIC2.83□□□□□ -1.96
TPM4P67936 RNA5SP282-201ENST00000516355 108 ntBASIC2.83□□□□□ -1.96
TPM4P67936 AC083923.1-201ENST00000523708 376 ntBASIC2.83□□□□□ -1.96
TPM4P67936 AC022080.3-201ENST00000544433 482 ntBASIC2.83□□□□□ -1.96
TPM4P67936 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.83□□□□□ -1.96
TPM4P67936 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.83□□□□□ -1.96
TPM4P67936 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.83□□□□□ -1.96
TPM4P67936 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TPM4P67936 AC024595.1-201ENST00000623088 387 ntBASIC2.83□□□□□ -1.96
TPM4P67936 AP000526.1-201ENST00000603308 1388 ntBASIC2.83□□□□□ -1.96
TPM4P67936 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TPM4P67936 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
TPM4P67936 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TPM4P67936 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.82□□□□□ -1.96
TPM4P67936 RNU5D-1-201ENST00000363299 116 ntBASIC2.82□□□□□ -1.96
TPM4P67936 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TPM4P67936 MIR9-1-201ENST00000385198 89 ntBASIC2.82□□□□□ -1.96
TPM4P67936 UBA52P6-201ENST00000399822 382 ntBASIC2.82□□□□□ -1.96
TPM4P67936 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.82□□□□□ -1.96
TPM4P67936 RPS15AP38-201ENST00000413110 372 ntBASIC2.82□□□□□ -1.96
TPM4P67936 UBE2V1P9-201ENST00000414760 368 ntBASIC2.82□□□□□ -1.96
TPM4P67936 AL389915.1-201ENST00000422463 466 ntBASIC2.82□□□□□ -1.96
TPM4P67936 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.82□□□□□ -1.96
TPM4P67936 AC004022.1-201ENST00000447766 1066 ntBASIC2.82□□□□□ -1.96
TPM4P67936 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.82□□□□□ -1.96
TPM4P67936 SNORA84-201ENST00000459229 133 ntBASIC2.82□□□□□ -1.96
TPM4P67936 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.82□□□□□ -1.96
TPM4P67936 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.82□□□□□ -1.96
TPM4P67936 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.82□□□□□ -1.96
TPM4P67936 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.82□□□□□ -1.96
TPM4P67936 AC012254.4-201ENST00000588843 273 ntBASIC2.82□□□□□ -1.96
TPM4P67936 AC008739.2-201ENST00000597006 317 ntBASIC2.82□□□□□ -1.96
TPM4P67936 AL137843.1-201ENST00000605078 385 ntBASIC2.82□□□□□ -1.96
TPM4P67936 AC073968.1-201ENST00000618594 637 ntBASIC2.82□□□□□ -1.96
TPM4P67936 CYP3A51P-201ENST00000633513 256 ntBASIC2.82□□□□□ -1.96
TPM4P67936 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
TPM4P67936 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
TPM4P67936 FRG1BP-201ENST00000278882 761 ntBASIC2.81□□□□□ -1.96
TPM4P67936 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TPM4P67936 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
TPM4P67936 SNORD62.1-201ENST00000362541 86 ntBASIC2.81□□□□□ -1.96
TPM4P67936 RNU6-730P-201ENST00000383954 104 ntBASIC2.81□□□□□ -1.96
TPM4P67936 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.81□□□□□ -1.96
TPM4P67936 AL592148.1-201ENST00000413568 445 ntBASIC2.81□□□□□ -1.96
TPM4P67936 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.81□□□□□ -1.96
TPM4P67936 MTCO1P57-201ENST00000432182 261 ntBASIC2.81□□□□□ -1.96
TPM4P67936 AC098826.1-201ENST00000433943 471 ntBASIC2.81□□□□□ -1.96
TPM4P67936 MTND2P21-201ENST00000436242 1042 ntBASIC2.81□□□□□ -1.96
TPM4P67936 FABP5P3-201ENST00000437960 408 ntBASIC2.81□□□□□ -1.96
TPM4P67936 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.81□□□□□ -1.96
TPM4P67936 RPS24P13-201ENST00000442520 397 ntBASIC2.81□□□□□ -1.96
TPM4P67936 MTND1P33-201ENST00000446251 917 ntBASIC2.81□□□□□ -1.96
TPM4P67936 AL513328.1-201ENST00000446460 224 ntBASIC2.81□□□□□ -1.96
TPM4P67936 AL671855.1-201ENST00000446875 1203 ntBASIC2.81□□□□□ -1.96
TPM4P67936 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.81□□□□□ -1.96
TPM4P67936 PRELID2P1-201ENST00000552837 301 ntBASIC2.81□□□□□ -1.96
TPM4P67936 AL161734.1-201ENST00000609720 557 ntBASIC2.81□□□□□ -1.96
TPM4P67936 AC106028.5-201ENST00000610332 395 ntBASIC2.81□□□□□ -1.96
TPM4P67936 CR589904.2-201ENST00000612533 440 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms