Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RN7SKP283-201ENST00000517197 270 ntBASIC1.96□□□□□ -2.1
LSM3P62310 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM3P62310 AC008562.1-201ENST00000521763 330 ntBASIC1.96□□□□□ -2.1
LSM3P62310 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.96□□□□□ -2.1
LSM3P62310 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.96□□□□□ -2.1
LSM3P62310 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM3P62310 MIR4443-201ENST00000585052 53 ntBASIC1.96□□□□□ -2.1
LSM3P62310 AC093227.2-201ENST00000589357 285 ntBASIC1.96□□□□□ -2.1
LSM3P62310 AL669831.4-202ENST00000590817 238 ntBASIC1.96□□□□□ -2.1
LSM3P62310 APOOP1-201ENST00000604695 592 ntBASIC1.96□□□□□ -2.1
LSM3P62310 AC046143.2-201ENST00000609789 160 ntBASIC1.96□□□□□ -2.1
LSM3P62310 MIR6840-201ENST00000611937 71 ntBASIC1.96□□□□□ -2.1
LSM3P62310 AC012314.7-201ENST00000619693 93 ntBASIC1.96□□□□□ -2.1
LSM3P62310 AC244100.1-202ENST00000621554 382 ntBASIC1.96□□□□□ -2.1
LSM3P62310 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM3P62310 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LSM3P62310 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LSM3P62310 RNA5SP72-201ENST00000364442 117 ntBASIC1.95□□□□□ -2.1
LSM3P62310 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LSM3P62310 MIR1303-201ENST00000408625 86 ntBASIC1.95□□□□□ -2.1
LSM3P62310 RNA5SP56-201ENST00000410277 118 ntBASIC1.95□□□□□ -2.1
LSM3P62310 RN7SKP140-201ENST00000411196 284 ntBASIC1.95□□□□□ -2.1
LSM3P62310 Z75741.2-201ENST00000417272 1167 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.95□□□□□ -2.1
LSM3P62310 AC091390.1-201ENST00000433904 331 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.95□□□□□ -2.1
LSM3P62310 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.95□□□□□ -2.1
LSM3P62310 AC018634.1-201ENST00000437554 401 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AC009296.1-201ENST00000443146 155 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.95□□□□□ -2.1
LSM3P62310 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.95□□□□□ -2.1
LSM3P62310 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.95□□□□□ -2.1
LSM3P62310 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.95□□□□□ -2.1
LSM3P62310 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.95□□□□□ -2.1
LSM3P62310 AC026241.1-201ENST00000517873 2142 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AP003385.6-201ENST00000531603 374 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.95□□□□□ -2.1
LSM3P62310 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC1.95□□□□□ -2.1
LSM3P62310 OR4K7P-201ENST00000580232 945 ntBASIC1.95□□□□□ -2.1
LSM3P62310 MIR5694-201ENST00000581190 76 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.95□□□□□ -2.1
LSM3P62310 AP001330.4-201ENST00000604350 154 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AC106900.2-201ENST00000604994 317 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AL121917.1-203ENST00000605534 577 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AP005212.4-201ENST00000614206 710 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.95□□□□□ -2.1
LSM3P62310 AC092608.2-201ENST00000624427 218 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AC110079.1-202ENST00000635213 138 ntBASIC1.95□□□□□ -2.1
LSM3P62310 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
LSM3P62310 AC123912.3-201ENST00000600907 1367 ntBASIC1.95□□□□□ -2.1
LSM3P62310 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LSM3P62310 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LSM3P62310 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LSM3P62310 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LSM3P62310 RNU6-386P-201ENST00000362650 107 ntBASIC1.94□□□□□ -2.1
LSM3P62310 RNA5SP258-201ENST00000362750 119 ntBASIC1.94□□□□□ -2.1
LSM3P62310 RNU1-85P-201ENST00000364127 164 ntBASIC1.94□□□□□ -2.1
LSM3P62310 SET-203ENST00000372688 801 ntTSL 2 BASIC1.94□□□□□ -2.1
LSM3P62310 RN7SKP27-201ENST00000410684 333 ntBASIC1.94□□□□□ -2.1
LSM3P62310 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.94□□□□□ -2.1
LSM3P62310 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LSM3P62310 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.94□□□□□ -2.1
LSM3P62310 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.94□□□□□ -2.1
LSM3P62310 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
LSM3P62310 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.94□□□□□ -2.1
LSM3P62310 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.94□□□□□ -2.1
LSM3P62310 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.94□□□□□ -2.1
LSM3P62310 SAP18P1-201ENST00000512058 390 ntBASIC1.94□□□□□ -2.1
LSM3P62310 AC133963.2-201ENST00000513686 578 ntBASIC1.94□□□□□ -2.1
LSM3P62310 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.94□□□□□ -2.1
LSM3P62310 RPPH1-2P-201ENST00000516688 293 ntBASIC1.94□□□□□ -2.1
LSM3P62310 COX6B1P6-201ENST00000522347 255 ntBASIC1.94□□□□□ -2.1
LSM3P62310 MTCYBP20-201ENST00000524239 1129 ntBASIC1.94□□□□□ -2.1
LSM3P62310 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.94□□□□□ -2.1
LSM3P62310 POLR2KP1-201ENST00000553226 168 ntBASIC1.94□□□□□ -2.1
LSM3P62310 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.94□□□□□ -2.1
LSM3P62310 AC005412.1-201ENST00000580812 1049 ntBASIC1.94□□□□□ -2.1
LSM3P62310 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.94□□□□□ -2.1
LSM3P62310 AC103810.6-201ENST00000606708 136 ntBASIC1.94□□□□□ -2.1
LSM3P62310 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.94□□□□□ -2.1
LSM3P62310 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
LSM3P62310 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.94□□□□□ -2.1
LSM3P62310 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.94□□□□□ -2.1
LSM3P62310 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.94□□□□□ -2.1
LSM3P62310 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LSM3P62310 AC016717.2-201ENST00000609089 5141 ntBASIC1.94□□□□□ -2.1
LSM3P62310 Z99496.1-201ENST00000469424 1477 ntBASIC1.94□□□□□ -2.1
LSM3P62310 AL109809.4-201ENST00000603520 2185 ntBASIC1.93□□□□□ -2.1
LSM3P62310 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.93□□□□□ -2.1
LSM3P62310 RNU6-989P-201ENST00000362756 107 ntBASIC1.93□□□□□ -2.1
LSM3P62310 SNORA44-201ENST00000384584 132 ntBASIC1.93□□□□□ -2.1
LSM3P62310 SNORA67.4-201ENST00000384688 142 ntBASIC1.93□□□□□ -2.1
LSM3P62310 MIR627-201ENST00000384979 97 ntBASIC1.93□□□□□ -2.1
LSM3P62310 MIR449B-201ENST00000384995 97 ntBASIC1.93□□□□□ -2.1
LSM3P62310 MT-TC-201ENST00000387405 66 ntBASIC1.93□□□□□ -2.1
LSM3P62310 RNU6-837P-201ENST00000391056 108 ntBASIC1.93□□□□□ -2.1
LSM3P62310 RPS4XP3-201ENST00000398541 413 ntBASIC1.93□□□□□ -2.1
LSM3P62310 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LSM3P62310 AC005005.2-201ENST00000420779 380 ntBASIC1.93□□□□□ -2.1
LSM3P62310 HSFY1P1-201ENST00000423928 1178 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms