Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.28□□□□□ -1.72
COPB1P53618 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.28□□□□□ -1.72
COPB1P53618 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.28□□□□□ -1.72
COPB1P53618 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.28□□□□□ -1.72
COPB1P53618 AL022154.1-201ENST00000604698 785 ntBASIC4.28□□□□□ -1.72
COPB1P53618 AC090578.1-201ENST00000604955 591 ntBASIC4.28□□□□□ -1.72
COPB1P53618 AC091167.4-201ENST00000605079 184 ntBASIC4.28□□□□□ -1.72
COPB1P53618 BRDTP1-201ENST00000605735 677 ntBASIC4.28□□□□□ -1.72
COPB1P53618 AC108479.2-201ENST00000617314 601 ntBASIC4.28□□□□□ -1.72
COPB1P53618 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.28□□□□□ -1.72
COPB1P53618 AC034229.5-201ENST00000624258 185 ntBASIC4.28□□□□□ -1.72
COPB1P53618 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COPB1P53618 AL049555.1-201ENST00000562834 1933 ntBASIC4.28□□□□□ -1.72
COPB1P53618 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.28□□□□□ -1.72
COPB1P53618 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.28□□□□□ -1.72
COPB1P53618 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COPB1P53618 MAPK10-373ENST00000641983 6772 ntBASIC4.28□□□□□ -1.72
COPB1P53618 AC130650.2-201ENST00000618736 2403 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.27□□□□□ -1.73
COPB1P53618 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
COPB1P53618 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COPB1P53618 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.27□□□□□ -1.73
COPB1P53618 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
COPB1P53618 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COPB1P53618 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COPB1P53618 RNU6-533P-201ENST00000384144 107 ntBASIC4.27□□□□□ -1.73
COPB1P53618 RNU6-1226P-201ENST00000384317 107 ntBASIC4.27□□□□□ -1.73
COPB1P53618 SNORA48.7-201ENST00000391302 135 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AL445189.1-201ENST00000405722 338 ntBASIC4.27□□□□□ -1.73
COPB1P53618 Y_RNA.604-201ENST00000410574 102 ntBASIC4.27□□□□□ -1.73
COPB1P53618 Y_RNA.608-201ENST00000410647 95 ntBASIC4.27□□□□□ -1.73
COPB1P53618 OR8G2P-201ENST00000412796 908 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AC108032.1-201ENST00000416706 207 ntBASIC4.27□□□□□ -1.73
COPB1P53618 MTND4LP11-201ENST00000422184 280 ntBASIC4.27□□□□□ -1.73
COPB1P53618 RPS6P12-201ENST00000432491 726 ntBASIC4.27□□□□□ -1.73
COPB1P53618 MTND3P21-201ENST00000433774 331 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.27□□□□□ -1.73
COPB1P53618 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COPB1P53618 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.27□□□□□ -1.73
COPB1P53618 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.27□□□□□ -1.73
COPB1P53618 PAXBP1P1-201ENST00000449315 447 ntBASIC4.27□□□□□ -1.73
COPB1P53618 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.27□□□□□ -1.73
COPB1P53618 AC104073.1-201ENST00000451988 151 ntBASIC4.27□□□□□ -1.73
COPB1P53618 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.27□□□□□ -1.73
COPB1P53618 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.27□□□□□ -1.73
COPB1P53618 TRBV12-2-201ENST00000489763 344 ntBASIC4.27□□□□□ -1.73
COPB1P53618 RPL9P6-201ENST00000492764 598 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AC024589.1-201ENST00000512207 263 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AC034159.1-201ENST00000513885 583 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AC104057.1-201ENST00000515547 497 ntBASIC4.27□□□□□ -1.73
COPB1P53618 RNA5SP179-201ENST00000517284 121 ntBASIC4.27□□□□□ -1.73
COPB1P53618 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.27□□□□□ -1.73
COPB1P53618 MTND4LP18-201ENST00000526864 291 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.27□□□□□ -1.73
COPB1P53618 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.27□□□□□ -1.73
COPB1P53618 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.27□□□□□ -1.73
COPB1P53618 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.27□□□□□ -1.73
COPB1P53618 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COPB1P53618 AC009977.1-201ENST00000586015 570 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AC022916.3-201ENST00000592961 742 ntBASIC4.27□□□□□ -1.73
COPB1P53618 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.27□□□□□ -1.73
COPB1P53618 AL139286.1-201ENST00000604465 483 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AL109618.2-201ENST00000605527 211 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AF250324.2-201ENST00000608299 610 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AP001506.1-201ENST00000615444 211 ntBASIC4.27□□□□□ -1.73
COPB1P53618 U4.5-201ENST00000617137 123 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AL445264.1-201ENST00000621719 171 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AC091905.1-201ENST00000624400 311 ntBASIC4.27□□□□□ -1.73
COPB1P53618 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.27□□□□□ -1.73
COPB1P53618 OR5AK4P-201ENST00000635912 903 ntBASIC4.27□□□□□ -1.73
COPB1P53618 AC099654.13-201ENST00000639774 207 ntBASIC4.27□□□□□ -1.73
COPB1P53618 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COPB1P53618 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COPB1P53618 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COPB1P53618 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COPB1P53618 AC022893.2-201ENST00000564832 3296 ntBASIC4.27□□□□□ -1.73
COPB1P53618 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
COPB1P53618 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
COPB1P53618 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COPB1P53618 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 RNU6-1243P-201ENST00000364028 107 ntBASIC4.26□□□□□ -1.73
COPB1P53618 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.26□□□□□ -1.73
COPB1P53618 RNU6-1279P-201ENST00000383917 103 ntBASIC4.26□□□□□ -1.73
COPB1P53618 RNU6-809P-201ENST00000384461 107 ntBASIC4.26□□□□□ -1.73
COPB1P53618 MIR23B-201ENST00000384832 97 ntBASIC4.26□□□□□ -1.73
COPB1P53618 SNORD115.1-201ENST00000391109 76 ntBASIC4.26□□□□□ -1.73
COPB1P53618 ENSAP1-201ENST00000392855 326 ntBASIC4.26□□□□□ -1.73
COPB1P53618 RPS3AP3-201ENST00000411933 242 ntBASIC4.26□□□□□ -1.73
COPB1P53618 AC022028.1-201ENST00000412054 408 ntBASIC4.26□□□□□ -1.73
COPB1P53618 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 RAC1P3-201ENST00000416129 580 ntBASIC4.26□□□□□ -1.73
COPB1P53618 RPL21P109-201ENST00000422213 475 ntBASIC4.26□□□□□ -1.73
COPB1P53618 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.26□□□□□ -1.73
COPB1P53618 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.26□□□□□ -1.73
COPB1P53618 RPL23AP74-201ENST00000437246 471 ntBASIC4.26□□□□□ -1.73
COPB1P53618 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms