Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 HPVC1-201ENST00000629899 1198 ntBASIC2.08□□□□□ -2.08
HTTP42858 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.08□□□□□ -2.08
HTTP42858 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HTTP42858 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HTTP42858 RPS3AP9-201ENST00000417027 792 ntBASIC2.08□□□□□ -2.08
HTTP42858 AL645939.1-201ENST00000453429 797 ntBASIC2.08□□□□□ -2.08
HTTP42858 GZMAP1-201ENST00000503054 631 ntBASIC2.08□□□□□ -2.08
HTTP42858 TTC39CP1-201ENST00000512513 755 ntBASIC2.08□□□□□ -2.08
HTTP42858 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.08□□□□□ -2.08
HTTP42858 AC131238.1-201ENST00000617135 328 ntBASIC2.08□□□□□ -2.08
HTTP42858 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.08□□□□□ -2.08
HTTP42858 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
HTTP42858 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HTTP42858 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HTTP42858 DEFA7P-201ENST00000382676 285 ntBASIC2.07□□□□□ -2.08
HTTP42858 AC104564.1-201ENST00000493028 407 ntBASIC2.07□□□□□ -2.08
HTTP42858 AC025048.6-202ENST00000627667 438 ntBASIC2.07□□□□□ -2.08
HTTP42858 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
HTTP42858 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HTTP42858 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.07□□□□□ -2.08
HTTP42858 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.07□□□□□ -2.08
HTTP42858 AIMP1P1-201ENST00000418670 937 ntBASIC2.07□□□□□ -2.08
HTTP42858 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.07□□□□□ -2.08
HTTP42858 AC027124.2-201ENST00000428249 105 ntBASIC2.07□□□□□ -2.08
HTTP42858 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HTTP42858 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.07□□□□□ -2.08
HTTP42858 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.07□□□□□ -2.08
HTTP42858 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.07□□□□□ -2.08
HTTP42858 AC092881.1-201ENST00000638218 2733 ntBASIC2.07□□□□□ -2.08
HTTP42858 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HTTP42858 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HTTP42858 SNORA51.4-201ENST00000364993 124 ntBASIC2.06□□□□□ -2.08
HTTP42858 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.06□□□□□ -2.08
HTTP42858 FGF7P3-201ENST00000454645 303 ntBASIC2.06□□□□□ -2.08
HTTP42858 AC021146.8-201ENST00000507455 733 ntBASIC2.06□□□□□ -2.08
HTTP42858 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.06□□□□□ -2.08
HTTP42858 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.06□□□□□ -2.08
HTTP42858 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.06□□□□□ -2.08
HTTP42858 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.06□□□□□ -2.08
HTTP42858 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.06□□□□□ -2.08
HTTP42858 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HTTP42858 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.06□□□□□ -2.08
HTTP42858 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
HTTP42858 AL513321.1-201ENST00000441175 761 ntBASIC2.06□□□□□ -2.08
HTTP42858 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.06□□□□□ -2.08
HTTP42858 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.06□□□□□ -2.08
HTTP42858 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.06□□□□□ -2.08
HTTP42858 AC092851.1-201ENST00000535964 478 ntBASIC2.06□□□□□ -2.08
HTTP42858 AC008015.1-201ENST00000555505 465 ntBASIC2.06□□□□□ -2.08
HTTP42858 HMGN2P47-201ENST00000559378 272 ntBASIC2.06□□□□□ -2.08
HTTP42858 AC010678.1-201ENST00000614118 713 ntBASIC2.06□□□□□ -2.08
HTTP42858 AC084035.1-201ENST00000634543 607 ntBASIC2.06□□□□□ -2.08
HTTP42858 MIR6767-201ENST00000637302 66 ntBASIC2.06□□□□□ -2.08
HTTP42858 AC244517.1-201ENST00000606030 2086 ntBASIC2.06□□□□□ -2.08
HTTP42858 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
HTTP42858 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HTTP42858 AL391987.6-201ENST00000305671 199 ntBASIC2.06□□□□□ -2.08
HTTP42858 GSTA12P-201ENST00000402398 508 ntBASIC2.06□□□□□ -2.08
HTTP42858 RN7SKP40-201ENST00000517211 242 ntBASIC2.06□□□□□ -2.08
HTTP42858 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.06□□□□□ -2.08
HTTP42858 AC022960.2-201ENST00000616300 666 ntBASIC2.06□□□□□ -2.08
HTTP42858 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC2.06□□□□□ -2.08
HTTP42858 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HTTP42858 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HTTP42858 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.05□□□□□ -2.08
HTTP42858 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.05□□□□□ -2.08
HTTP42858 VWA8P1-201ENST00000510889 176 ntBASIC2.05□□□□□ -2.08
HTTP42858 AL078603.1-201ENST00000603824 313 ntBASIC2.05□□□□□ -2.08
HTTP42858 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.05□□□□□ -2.08
HTTP42858 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.05□□□□□ -2.08
HTTP42858 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.05□□□□□ -2.08
HTTP42858 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.05□□□□□ -2.08
HTTP42858 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.05□□□□□ -2.08
HTTP42858 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.05□□□□□ -2.08
HTTP42858 AP006248.2-201ENST00000623309 592 ntBASIC2.05□□□□□ -2.08
HTTP42858 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.05□□□□□ -2.08
HTTP42858 AF127577.6-201ENST00000623352 2191 ntBASIC2.04□□□□□ -2.08
HTTP42858 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HTTP42858 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.04□□□□□ -2.08
HTTP42858 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.04□□□□□ -2.08
HTTP42858 RN7SKP49-201ENST00000516675 260 ntBASIC2.04□□□□□ -2.08
HTTP42858 AC005951.1-201ENST00000576706 485 ntBASIC2.04□□□□□ -2.08
HTTP42858 VN1R7P-201ENST00000619242 903 ntBASIC2.04□□□□□ -2.08
HTTP42858 MTCO1P22-201ENST00000604619 1360 ntBASIC2.04□□□□□ -2.08
HTTP42858 AC244505.4-201ENST00000434905 287 ntBASIC2.04□□□□□ -2.08
HTTP42858 SSXP5-201ENST00000443473 287 ntBASIC2.04□□□□□ -2.08
HTTP42858 USP9YP10-201ENST00000454868 628 ntBASIC2.04□□□□□ -2.08
HTTP42858 SNRPFP4-201ENST00000456366 242 ntBASIC2.04□□□□□ -2.08
HTTP42858 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC2.04□□□□□ -2.08
HTTP42858 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.04□□□□□ -2.08
HTTP42858 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.04□□□□□ -2.08
HTTP42858 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HTTP42858 CDC27P2-201ENST00000425026 1922 ntBASIC2.04□□□□□ -2.08
HTTP42858 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.04□□□□□ -2.08
HTTP42858 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
HTTP42858 POU5F1P7-201ENST00000508759 541 ntBASIC2.04□□□□□ -2.08
HTTP42858 SNORD88.1-201ENST00000408684 91 ntBASIC2.03□□□□□ -2.08
HTTP42858 MTND2P29-201ENST00000438595 412 ntBASIC2.03□□□□□ -2.08
HTTP42858 AL138799.3-201ENST00000438968 350 ntBASIC2.03□□□□□ -2.08
HTTP42858 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms