Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL049781.1-201ENST00000623195 3585 ntBASIC3.23□□□□□ -1.89
PTPN6P29350 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.23□□□□□ -1.89
PTPN6P29350 PWAR6-201ENST00000552334 4618 ntBASIC3.23□□□□□ -1.89
PTPN6P29350 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PTPN6P29350 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PTPN6P29350 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
PTPN6P29350 ZNF542P-204ENST00000482727 1305 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.22□□□□□ -1.89
PTPN6P29350 CUL1P1-201ENST00000509510 2425 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PTPN6P29350 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.22□□□□□ -1.89
PTPN6P29350 OR5H2-201ENST00000355273 945 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PTPN6P29350 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
PTPN6P29350 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.22□□□□□ -1.89
PTPN6P29350 RNU6-413P-201ENST00000384115 107 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AL590084.1-201ENST00000407885 387 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PTPN6P29350 AC245052.5-201ENST00000416320 649 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AL356968.1-201ENST00000416622 474 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.22□□□□□ -1.89
PTPN6P29350 AC019178.2-201ENST00000423595 505 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 ATP5JP1-201ENST00000431631 322 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 RPL23AP83-201ENST00000434984 473 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 RPL23AP22-201ENST00000437556 453 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 SDR42E1P3-201ENST00000438345 502 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.22□□□□□ -1.89
PTPN6P29350 EXOSC3P1-201ENST00000448649 500 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.22□□□□□ -1.89
PTPN6P29350 AC097262.1-201ENST00000452559 548 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 RBMY2UP-201ENST00000453474 324 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.22□□□□□ -1.89
PTPN6P29350 ST13P14-201ENST00000474095 734 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.22□□□□□ -1.89
PTPN6P29350 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.22□□□□□ -1.89
PTPN6P29350 SCARNA20.6-201ENST00000517251 106 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AC107934.2-201ENST00000518653 310 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.22□□□□□ -1.89
PTPN6P29350 AC005832.3-201ENST00000537929 631 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AC004024.1-201ENST00000549244 247 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AC005476.1-201ENST00000554427 397 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.22□□□□□ -1.89
PTPN6P29350 AP005205.1-201ENST00000563503 508 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AL132657.2-201ENST00000564417 358 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 FAM60BP-201ENST00000578364 658 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AC015688.2-201ENST00000584523 262 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.22□□□□□ -1.89
PTPN6P29350 AL133445.2-201ENST00000611191 527 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.22□□□□□ -1.89
PTPN6P29350 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.22□□□□□ -1.89
PTPN6P29350 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.22□□□□□ -1.89
PTPN6P29350 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.22□□□□□ -1.89
PTPN6P29350 AC007496.3-201ENST00000624987 3443 ntBASIC3.22□□□□□ -1.89
PTPN6P29350 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
PTPN6P29350 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.21□□□□□ -1.9
PTPN6P29350 AP002907.1-201ENST00000606361 1430 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPN6P29350 RNA5SP293-201ENST00000410527 113 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPN6P29350 RPS15AP6-201ENST00000420703 385 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 MTATP6P4-201ENST00000427725 675 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 AC079780.1-201ENST00000428259 207 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN6P29350 ISCA1P2-201ENST00000438679 421 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PTPN6P29350 MTND2P20-201ENST00000440805 661 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 RPL23AP76-201ENST00000441860 458 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 AC007327.1-201ENST00000447461 264 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 AC008264.1-201ENST00000447612 367 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 AL031313.1-201ENST00000448435 256 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPN6P29350 AC104308.1-201ENST00000454621 333 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 HMGN1P18-201ENST00000457642 277 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 RPL23AP67-201ENST00000465341 474 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.21□□□□□ -1.9
PTPN6P29350 AC011979.1-201ENST00000472300 483 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 RPS4XP22-201ENST00000480755 780 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 RN7SL293P-201ENST00000481765 281 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 AC006483.1-201ENST00000487308 313 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN6P29350 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN6P29350 SNORA31.1-201ENST00000515993 133 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 RNU6-1095P-201ENST00000516148 108 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 SNORA31.5-201ENST00000516190 133 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPN6P29350 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.21□□□□□ -1.9
PTPN6P29350 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.21□□□□□ -1.9
PTPN6P29350 HSPE1P3-201ENST00000559254 309 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN6P29350 AC080013.4-201ENST00000607624 649 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 AL451074.6-201ENST00000608512 729 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 AC243773.3-201ENST00000613270 256 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPN6P29350 MIR6076-201ENST00000617521 113 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN6P29350 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.21□□□□□ -1.9
PTPN6P29350 AC010608.3-201ENST00000625048 527 ntBASIC3.21□□□□□ -1.9
PTPN6P29350 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN6P29350 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN6P29350 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms