Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.34□□□□□ -1.71
RHOP08100 AL049780.3-201ENST00000624612 1583 ntBASIC4.34□□□□□ -1.71
RHOP08100 AC092447.10-201ENST00000620607 1652 ntBASIC4.34□□□□□ -1.71
RHOP08100 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.34□□□□□ -1.71
RHOP08100 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RHOP08100 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RHOP08100 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.34□□□□□ -1.72
RHOP08100 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RHOP08100 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RHOP08100 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RHOP08100 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RHOP08100 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RHOP08100 PTMAP2-201ENST00000397627 327 ntBASIC4.33□□□□□ -1.72
RHOP08100 RNU6ATAC-201ENST00000408749 126 ntBASIC4.33□□□□□ -1.72
RHOP08100 MTND3P17-201ENST00000416968 344 ntBASIC4.33□□□□□ -1.72
RHOP08100 BX295541.1-201ENST00000417774 250 ntBASIC4.33□□□□□ -1.72
RHOP08100 AL161631.1-201ENST00000417933 486 ntBASIC4.33□□□□□ -1.72
RHOP08100 CYCSP10-201ENST00000417973 294 ntBASIC4.33□□□□□ -1.72
RHOP08100 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.33□□□□□ -1.72
RHOP08100 AL589872.1-201ENST00000426602 288 ntBASIC4.33□□□□□ -1.72
RHOP08100 ZNF863P-201ENST00000426746 417 ntBASIC4.33□□□□□ -1.72
RHOP08100 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.33□□□□□ -1.72
RHOP08100 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.33□□□□□ -1.72
RHOP08100 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.33□□□□□ -1.72
RHOP08100 ARPC3P1-201ENST00000437218 533 ntBASIC4.33□□□□□ -1.72
RHOP08100 AC073587.1-201ENST00000447093 876 ntBASIC4.33□□□□□ -1.72
RHOP08100 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.33□□□□□ -1.72
RHOP08100 AC104073.1-201ENST00000451988 151 ntBASIC4.33□□□□□ -1.72
RHOP08100 C1DP4-201ENST00000455429 424 ntBASIC4.33□□□□□ -1.72
RHOP08100 AC022034.3-201ENST00000471393 478 ntBASIC4.33□□□□□ -1.72
RHOP08100 AC087312.1-201ENST00000471411 480 ntBASIC4.33□□□□□ -1.72
RHOP08100 RPL23AP65-201ENST00000475608 468 ntBASIC4.33□□□□□ -1.72
RHOP08100 RPS3AP14-201ENST00000483907 780 ntBASIC4.33□□□□□ -1.72
RHOP08100 AP001025.2-201ENST00000490908 477 ntBASIC4.33□□□□□ -1.72
RHOP08100 AC110792.1-201ENST00000491826 472 ntBASIC4.33□□□□□ -1.72
RHOP08100 AC114967.1-201ENST00000504890 259 ntBASIC4.33□□□□□ -1.72
RHOP08100 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 AC010493.1-201ENST00000513479 292 ntBASIC4.33□□□□□ -1.72
RHOP08100 RN7SKP82-201ENST00000516786 223 ntBASIC4.33□□□□□ -1.72
RHOP08100 FAM92A1P1-201ENST00000528023 890 ntBASIC4.33□□□□□ -1.72
RHOP08100 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 AK6P1-201ENST00000540219 478 ntBASIC4.33□□□□□ -1.72
RHOP08100 HSPE1P5-201ENST00000561489 272 ntBASIC4.33□□□□□ -1.72
RHOP08100 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.33□□□□□ -1.72
RHOP08100 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 MIR4504-201ENST00000577413 92 ntBASIC4.33□□□□□ -1.72
RHOP08100 AP000907.4-201ENST00000604143 237 ntBASIC4.33□□□□□ -1.72
RHOP08100 AC011816.2-201ENST00000607089 556 ntBASIC4.33□□□□□ -1.72
RHOP08100 RNU6-87P-201ENST00000607561 108 ntBASIC4.33□□□□□ -1.72
RHOP08100 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
RHOP08100 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 CYP3A51P-201ENST00000633513 256 ntBASIC4.33□□□□□ -1.72
RHOP08100 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
RHOP08100 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.33□□□□□ -1.72
RHOP08100 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RHOP08100 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.33□□□□□ -1.72
RHOP08100 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.33□□□□□ -1.72
RHOP08100 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.33□□□□□ -1.72
RHOP08100 Z73965.1-201ENST00000623412 2297 ntBASIC4.33□□□□□ -1.72
RHOP08100 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RHOP08100 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.32□□□□□ -1.72
RHOP08100 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.32□□□□□ -1.72
RHOP08100 AC097714.1-201ENST00000511272 1647 ntBASIC4.32□□□□□ -1.72
RHOP08100 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RHOP08100 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.32□□□□□ -1.72
RHOP08100 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHOP08100 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.32□□□□□ -1.72
RHOP08100 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHOP08100 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RHOP08100 RNU6-1226P-201ENST00000384317 107 ntBASIC4.32□□□□□ -1.72
RHOP08100 RNU6-780P-201ENST00000391030 104 ntBASIC4.32□□□□□ -1.72
RHOP08100 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHOP08100 RN7SKP167-201ENST00000411047 285 ntBASIC4.32□□□□□ -1.72
RHOP08100 HSPE1P12-201ENST00000412576 301 ntBASIC4.32□□□□□ -1.72
RHOP08100 VDAC1P9-201ENST00000412766 841 ntBASIC4.32□□□□□ -1.72
RHOP08100 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.32□□□□□ -1.72
RHOP08100 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.32□□□□□ -1.72
RHOP08100 AL353777.1-201ENST00000425552 326 ntBASIC4.32□□□□□ -1.72
RHOP08100 AC073464.1-201ENST00000429823 534 ntBASIC4.32□□□□□ -1.72
RHOP08100 AL445584.1-201ENST00000431451 330 ntBASIC4.32□□□□□ -1.72
RHOP08100 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.32□□□□□ -1.72
RHOP08100 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.32□□□□□ -1.72
RHOP08100 AC006011.1-201ENST00000442758 349 ntBASIC4.32□□□□□ -1.72
RHOP08100 HSPE1P28-201ENST00000443139 211 ntBASIC4.32□□□□□ -1.72
RHOP08100 FAM103A2P-201ENST00000444122 354 ntBASIC4.32□□□□□ -1.72
RHOP08100 MTND5P20-201ENST00000448677 143 ntBASIC4.32□□□□□ -1.72
RHOP08100 MTND3P10-201ENST00000450967 341 ntBASIC4.32□□□□□ -1.72
RHOP08100 MTCO3P20-201ENST00000454926 688 ntBASIC4.32□□□□□ -1.72
RHOP08100 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.32□□□□□ -1.72
RHOP08100 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.32□□□□□ -1.72
RHOP08100 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.32□□□□□ -1.72
RHOP08100 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms