Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU6-582P-201ENST00000362989 107 ntBASIC2.57□□□□□ -2
CD74P04233 RNU6-1249P-201ENST00000363237 111 ntBASIC2.57□□□□□ -2
CD74P04233 RNA5SP387-201ENST00000364226 106 ntBASIC2.57□□□□□ -2
CD74P04233 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CD74P04233 MIR34B-201ENST00000385076 84 ntBASIC2.57□□□□□ -2
CD74P04233 RPL7P27-201ENST00000403775 720 ntBASIC2.57□□□□□ -2
CD74P04233 FAT1P1-201ENST00000406588 507 ntBASIC2.57□□□□□ -2
CD74P04233 AL139098.1-201ENST00000407291 389 ntBASIC2.57□□□□□ -2
CD74P04233 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.57□□□□□ -2
CD74P04233 AC096533.1-201ENST00000411645 353 ntBASIC2.57□□□□□ -2
CD74P04233 AL136133.1-201ENST00000413694 376 ntBASIC2.57□□□□□ -2
CD74P04233 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.57□□□□□ -2
CD74P04233 MTCYBP32-201ENST00000427945 1084 ntBASIC2.57□□□□□ -2
CD74P04233 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.57□□□□□ -2
CD74P04233 RPL23AP83-201ENST00000434984 473 ntBASIC2.57□□□□□ -2
CD74P04233 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.57□□□□□ -2
CD74P04233 MUPP-201ENST00000438111 566 ntBASIC2.57□□□□□ -2
CD74P04233 RPL21P23-201ENST00000446654 460 ntBASIC2.57□□□□□ -2
CD74P04233 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.57□□□□□ -2
CD74P04233 OR6K1P-201ENST00000456766 971 ntBASIC2.57□□□□□ -2
CD74P04233 RPL32P34-201ENST00000486380 400 ntBASIC2.57□□□□□ -2
CD74P04233 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.57□□□□□ -2
CD74P04233 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.57□□□□□ -2
CD74P04233 MTCO3P44-201ENST00000510977 541 ntBASIC2.57□□□□□ -2
CD74P04233 SNORA31.8-201ENST00000516327 108 ntBASIC2.57□□□□□ -2
CD74P04233 AC023632.1-201ENST00000518463 375 ntBASIC2.57□□□□□ -2
CD74P04233 AP001804.3-201ENST00000525146 880 ntBASIC2.57□□□□□ -2
CD74P04233 OR8I1P-201ENST00000529291 931 ntBASIC2.57□□□□□ -2
CD74P04233 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.57□□□□□ -2
CD74P04233 SETP2-201ENST00000553886 926 ntBASIC2.57□□□□□ -2
CD74P04233 AP005205.1-201ENST00000563503 508 ntBASIC2.57□□□□□ -2
CD74P04233 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.57□□□□□ -2
CD74P04233 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.57□□□□□ -2
CD74P04233 COX6CP3-201ENST00000580869 223 ntBASIC2.57□□□□□ -2
CD74P04233 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.57□□□□□ -2
CD74P04233 AC006504.3-201ENST00000586818 523 ntBASIC2.57□□□□□ -2
CD74P04233 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.57□□□□□ -2
CD74P04233 RPL23AP78-201ENST00000599928 470 ntBASIC2.57□□□□□ -2
CD74P04233 SRGNP1-201ENST00000603392 451 ntBASIC2.57□□□□□ -2
CD74P04233 AC007179.3-201ENST00000604976 235 ntBASIC2.57□□□□□ -2
CD74P04233 AL583856.2-201ENST00000606298 543 ntBASIC2.57□□□□□ -2
CD74P04233 AP005137.2-201ENST00000609238 400 ntBASIC2.57□□□□□ -2
CD74P04233 AC124016.2-201ENST00000610058 665 ntBASIC2.57□□□□□ -2
CD74P04233 AC100793.4-201ENST00000613683 429 ntBASIC2.57□□□□□ -2
CD74P04233 AC068722.2-201ENST00000618734 544 ntBASIC2.57□□□□□ -2
CD74P04233 AC126544.2-201ENST00000625174 749 ntBASIC2.57□□□□□ -2
CD74P04233 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.57□□□□□ -2
CD74P04233 U6.105-201ENST00000637379 88 ntBASIC2.57□□□□□ -2
CD74P04233 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CD74P04233 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.57□□□□□ -2
CD74P04233 AC244517.1-201ENST00000606030 2086 ntBASIC2.57□□□□□ -2
CD74P04233 AC099654.7-201ENST00000635788 2127 ntBASIC2.57□□□□□ -2
CD74P04233 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.57□□□□□ -2
CD74P04233 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CD74P04233 AC073325.2-201ENST00000339545 159 ntBASIC2.56□□□□□ -2
CD74P04233 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.56□□□□□ -2
CD74P04233 RNU6-115P-201ENST00000364310 107 ntBASIC2.56□□□□□ -2
CD74P04233 SNORD116-23-201ENST00000384645 92 ntBASIC2.56□□□□□ -2
CD74P04233 RNU6-821P-201ENST00000390995 107 ntBASIC2.56□□□□□ -2
CD74P04233 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.56□□□□□ -2
CD74P04233 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.56□□□□□ -2
CD74P04233 AL133264.1-201ENST00000407157 562 ntBASIC2.56□□□□□ -2
CD74P04233 MIR1289-1-201ENST00000408836 144 ntBASIC2.56□□□□□ -2
CD74P04233 KRR1P1-201ENST00000419430 803 ntBASIC2.56□□□□□ -2
CD74P04233 AL035410.1-201ENST00000427409 427 ntBASIC2.56□□□□□ -2
CD74P04233 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.56□□□□□ -2
CD74P04233 ARF4P4-201ENST00000439608 520 ntBASIC2.56□□□□□ -2
CD74P04233 PRDX3P3-201ENST00000447765 522 ntBASIC2.56□□□□□ -2
CD74P04233 DYNLL1P6-201ENST00000503440 264 ntBASIC2.56□□□□□ -2
CD74P04233 SUMO2P5-201ENST00000506790 245 ntBASIC2.56□□□□□ -2
CD74P04233 AC112206.4-201ENST00000515142 405 ntBASIC2.56□□□□□ -2
CD74P04233 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.56□□□□□ -2
CD74P04233 AC104986.1-201ENST00000517978 436 ntBASIC2.56□□□□□ -2
CD74P04233 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.56□□□□□ -2
CD74P04233 AC104417.1-201ENST00000523974 751 ntBASIC2.56□□□□□ -2
CD74P04233 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.56□□□□□ -2
CD74P04233 AP000857.1-201ENST00000532151 543 ntBASIC2.56□□□□□ -2
CD74P04233 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.56□□□□□ -2
CD74P04233 LSM6P2-201ENST00000552208 177 ntBASIC2.56□□□□□ -2
CD74P04233 AC034105.3-201ENST00000565294 442 ntBASIC2.56□□□□□ -2
CD74P04233 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.56□□□□□ -2
CD74P04233 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.56□□□□□ -2
CD74P04233 AC126365.2-201ENST00000580630 379 ntBASIC2.56□□□□□ -2
CD74P04233 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.56□□□□□ -2
CD74P04233 BNIP3P31-201ENST00000604515 566 ntBASIC2.56□□□□□ -2
CD74P04233 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.56□□□□□ -2
CD74P04233 AC009570.1-201ENST00000609599 745 ntBASIC2.56□□□□□ -2
CD74P04233 AC243312.2-201ENST00000623340 601 ntBASIC2.56□□□□□ -2
CD74P04233 AP002371.2-201ENST00000624450 503 ntBASIC2.56□□□□□ -2
CD74P04233 AC106858.1-201ENST00000637497 429 ntBASIC2.56□□□□□ -2
CD74P04233 ASNSP3-201ENST00000451989 1306 ntBASIC2.56□□□□□ -2
CD74P04233 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.56□□□□□ -2
CD74P04233 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.56□□□□□ -2
CD74P04233 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CD74P04233 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.55□□□□□ -2
CD74P04233 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CD74P04233 Y_RNA.333-201ENST00000365274 102 ntBASIC2.55□□□□□ -2
CD74P04233 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.55□□□□□ -2
CD74P04233 MIR218-2-201ENST00000385006 110 ntBASIC2.55□□□□□ -2
CD74P04233 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms