Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 MTND5P26-201ENST00000426018 1752 ntBASIC4.52□□□□□ -1.69
COL3A1P02461 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.52□□□□□ -1.69
COL3A1P02461 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL3A1P02461 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL3A1P02461 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
COL3A1P02461 AP005901.5-201ENST00000545779 1796 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL3A1P02461 AC093719.1-202ENST00000392735 373 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.51□□□□□ -1.69
COL3A1P02461 RPS7P13-201ENST00000413955 498 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.51□□□□□ -1.69
COL3A1P02461 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.51□□□□□ -1.69
COL3A1P02461 DNAJC19P4-201ENST00000440115 345 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.51□□□□□ -1.69
COL3A1P02461 BTF3P5-201ENST00000457252 467 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.51□□□□□ -1.69
COL3A1P02461 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.51□□□□□ -1.69
COL3A1P02461 AC104849.1-201ENST00000462623 405 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 AC092989.1-201ENST00000481235 277 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.51□□□□□ -1.69
COL3A1P02461 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.51□□□□□ -1.69
COL3A1P02461 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.51□□□□□ -1.69
COL3A1P02461 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.51□□□□□ -1.69
COL3A1P02461 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.51□□□□□ -1.69
COL3A1P02461 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.51□□□□□ -1.69
COL3A1P02461 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.51□□□□□ -1.69
COL3A1P02461 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.51□□□□□ -1.69
COL3A1P02461 AC037471.2-201ENST00000564941 598 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 MIR4528-201ENST00000577763 90 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 AL117336.2-201ENST00000602435 335 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 AC106028.5-201ENST00000610332 395 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 AL357080.1-201ENST00000617394 239 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COL3A1P02461 AL136221.1-201ENST00000621449 509 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.51□□□□□ -1.69
COL3A1P02461 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.51□□□□□ -1.69
COL3A1P02461 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
COL3A1P02461 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.51□□□□□ -1.69
COL3A1P02461 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL3A1P02461 AC027287.1-201ENST00000553115 1453 ntBASIC4.51□□□□□ -1.69
COL3A1P02461 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL3A1P02461 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL3A1P02461 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
COL3A1P02461 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.5□□□□□ -1.69
COL3A1P02461 AC027644.1-201ENST00000419595 298 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 AC007435.1-201ENST00000421086 415 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.5□□□□□ -1.69
COL3A1P02461 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.5□□□□□ -1.69
COL3A1P02461 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.5□□□□□ -1.69
COL3A1P02461 AC092427.1-201ENST00000439177 601 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.5□□□□□ -1.69
COL3A1P02461 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.5□□□□□ -1.69
COL3A1P02461 NFU1P2-201ENST00000448700 469 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 CYCSP35-201ENST00000451978 304 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 AL133244.1-201ENST00000456007 258 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 RPL5P13-201ENST00000462840 709 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.5□□□□□ -1.69
COL3A1P02461 AP000852.1-201ENST00000472460 573 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 HMGN1P10-201ENST00000474557 553 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
COL3A1P02461 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.5□□□□□ -1.69
COL3A1P02461 OR8L1P-201ENST00000534005 955 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 AC124947.2-202ENST00000552735 133 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 HMGN2P47-201ENST00000559378 272 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.5□□□□□ -1.69
COL3A1P02461 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.5□□□□□ -1.69
COL3A1P02461 AC010680.3-201ENST00000604215 520 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.5□□□□□ -1.69
COL3A1P02461 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL3A1P02461 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.5□□□□□ -1.69
COL3A1P02461 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL3A1P02461 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.5□□□□□ -1.69
COL3A1P02461 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
COL3A1P02461 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.5□□□□□ -1.69
COL3A1P02461 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.5□□□□□ -1.69
COL3A1P02461 TEX21P-201ENST00000447107 1476 ntBASIC4.5□□□□□ -1.69
COL3A1P02461 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.5□□□□□ -1.69
COL3A1P02461 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL3A1P02461 CBX3P1-201ENST00000325243 554 ntBASIC4.49□□□□□ -1.69
COL3A1P02461 Y_RNA.9-201ENST00000362354 101 ntBASIC4.49□□□□□ -1.69
COL3A1P02461 Y_RNA.256-201ENST00000364594 104 ntBASIC4.49□□□□□ -1.69
COL3A1P02461 RNU6-348P-201ENST00000384386 107 ntBASIC4.49□□□□□ -1.69
COL3A1P02461 Y_RNA.582-201ENST00000391023 95 ntBASIC4.49□□□□□ -1.69
COL3A1P02461 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.49□□□□□ -1.69
COL3A1P02461 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.49□□□□□ -1.69
COL3A1P02461 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.49□□□□□ -1.69
COL3A1P02461 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.49□□□□□ -1.69
COL3A1P02461 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.49□□□□□ -1.69
COL3A1P02461 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.49□□□□□ -1.69
COL3A1P02461 MRPS31P2-201ENST00000451581 518 ntBASIC4.49□□□□□ -1.69
COL3A1P02461 MTCYBP17-201ENST00000503579 789 ntBASIC4.49□□□□□ -1.69
COL3A1P02461 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.49□□□□□ -1.69
COL3A1P02461 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.49□□□□□ -1.69
COL3A1P02461 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.49□□□□□ -1.69
COL3A1P02461 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL3A1P02461 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.49□□□□□ -1.69
COL3A1P02461 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL3A1P02461 AL442663.2-201ENST00000554385 511 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms