Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 SNRPFP4-201ENST00000456366 242 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 MTCO3P2-201ENST00000457365 171 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.51□□□□□ -1.85
LMX1BO60663 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.51□□□□□ -1.85
LMX1BO60663 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.51□□□□□ -1.85
LMX1BO60663 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.51□□□□□ -1.85
LMX1BO60663 RNU6-430P-201ENST00000517078 107 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.51□□□□□ -1.85
LMX1BO60663 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.51□□□□□ -1.85
LMX1BO60663 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.51□□□□□ -1.85
LMX1BO60663 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.51□□□□□ -1.85
LMX1BO60663 AC068587.4-201ENST00000533893 186 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.51□□□□□ -1.85
LMX1BO60663 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.51□□□□□ -1.85
LMX1BO60663 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.51□□□□□ -1.85
LMX1BO60663 AL133457.1-201ENST00000564251 987 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 MIR5684-201ENST00000585074 65 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.51□□□□□ -1.85
LMX1BO60663 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.51□□□□□ -1.85
LMX1BO60663 BNIP3P8-201ENST00000597863 560 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LMX1BO60663 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.51□□□□□ -1.85
LMX1BO60663 AL159169.3-201ENST00000608871 561 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 MIR7151-201ENST00000617477 60 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 U6.42-201ENST00000618440 107 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 AC136475.10-201ENST00000620253 385 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.51□□□□□ -1.85
LMX1BO60663 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LMX1BO60663 Z73965.1-201ENST00000623412 2297 ntBASIC3.51□□□□□ -1.85
LMX1BO60663 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LMX1BO60663 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LMX1BO60663 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.5□□□□□ -1.85
LMX1BO60663 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
LMX1BO60663 ELF2P3-201ENST00000445099 1506 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LMX1BO60663 DCAF13P1-201ENST00000495256 1330 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.5□□□□□ -1.85
LMX1BO60663 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
LMX1BO60663 AC011155.1-201ENST00000316512 456 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LMX1BO60663 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LMX1BO60663 RNU6-289P-201ENST00000364093 107 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 RNU5E-4P-201ENST00000364931 120 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 SNORA70.4-201ENST00000365509 134 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
LMX1BO60663 RNU6-1293P-201ENST00000384077 107 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 RNU6-533P-201ENST00000384144 107 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 MIR649-201ENST00000384843 97 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 MIR181A1-201ENST00000385026 110 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 DSTNP4-201ENST00000399472 474 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 Y_RNA.608-201ENST00000410647 95 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 TPMTP2-201ENST00000414372 726 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.5□□□□□ -1.85
LMX1BO60663 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.5□□□□□ -1.85
LMX1BO60663 AC099336.2-201ENST00000422457 254 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 DPPA2P1-201ENST00000428060 556 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LMX1BO60663 NPM1P34-201ENST00000428821 893 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC009961.2-201ENST00000435771 251 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.5□□□□□ -1.85
LMX1BO60663 MTND6P13-201ENST00000443510 523 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.5□□□□□ -1.85
LMX1BO60663 GAPDHP17-201ENST00000449858 1001 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.5□□□□□ -1.85
LMX1BO60663 AL590365.1-201ENST00000450788 243 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.5□□□□□ -1.85
LMX1BO60663 AC099560.2-201ENST00000457554 255 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 RNA5SP246-201ENST00000458909 119 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC069499.1-201ENST00000489433 509 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC012170.1-201ENST00000495139 359 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 RPL29P14-201ENST00000495837 428 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 FAM92A1P2-202ENST00000504766 877 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 NDUFB4P2-201ENST00000509515 391 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC026412.2-201ENST00000512270 1075 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 ARL2BPP6-201ENST00000512757 439 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC018797.3-201ENST00000513388 1241 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 MTND5P4-201ENST00000514978 288 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 RN7SKP96-201ENST00000516948 297 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 MTCO2P4-201ENST00000517968 247 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.5□□□□□ -1.85
LMX1BO60663 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.5□□□□□ -1.85
LMX1BO60663 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.5□□□□□ -1.85
LMX1BO60663 AC022968.1-201ENST00000567372 442 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 MTCO3P24-201ENST00000572729 782 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.5□□□□□ -1.85
LMX1BO60663 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.5□□□□□ -1.85
LMX1BO60663 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.5□□□□□ -1.85
LMX1BO60663 AP001506.1-201ENST00000615444 211 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 RNU6-156P-201ENST00000621869 107 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC138649.3-201ENST00000622154 254 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 CR381653.2-201ENST00000624041 768 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 AC124864.2-201ENST00000624736 186 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 U6.101-201ENST00000637707 76 ntBASIC3.5□□□□□ -1.85
LMX1BO60663 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.5□□□□□ -1.85
LMX1BO60663 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
LMX1BO60663 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LMX1BO60663 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LMX1BO60663 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LMX1BO60663 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms