Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.5□□□□□ -1.85
PRKNO60260 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.5□□□□□ -1.85
PRKNO60260 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.5□□□□□ -1.85
PRKNO60260 AC024589.1-201ENST00000512207 263 ntBASIC3.5□□□□□ -1.85
PRKNO60260 AC034159.1-201ENST00000513885 583 ntBASIC3.5□□□□□ -1.85
PRKNO60260 TRMT10BP1-201ENST00000519377 943 ntBASIC3.5□□□□□ -1.85
PRKNO60260 COX6CP8-201ENST00000522620 226 ntBASIC3.5□□□□□ -1.85
PRKNO60260 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.5□□□□□ -1.85
PRKNO60260 AP002748.2-201ENST00000528671 348 ntBASIC3.5□□□□□ -1.85
PRKNO60260 OR5AP1P-201ENST00000529730 940 ntBASIC3.5□□□□□ -1.85
PRKNO60260 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 AC135001.1-201ENST00000544546 283 ntBASIC3.5□□□□□ -1.85
PRKNO60260 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.5□□□□□ -1.85
PRKNO60260 AP001180.3-201ENST00000582221 145 ntBASIC3.5□□□□□ -1.85
PRKNO60260 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 AC087683.1-201ENST00000591187 441 ntBASIC3.5□□□□□ -1.85
PRKNO60260 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 DEFB131E-202ENST00000602581 683 ntBASIC3.5□□□□□ -1.85
PRKNO60260 AC007566.2-201ENST00000603642 413 ntBASIC3.5□□□□□ -1.85
PRKNO60260 AC112187.2-201ENST00000604345 283 ntBASIC3.5□□□□□ -1.85
PRKNO60260 BRDTP1-201ENST00000605735 677 ntBASIC3.5□□□□□ -1.85
PRKNO60260 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 AL359715.5-201ENST00000623431 443 ntBASIC3.5□□□□□ -1.85
PRKNO60260 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 AC119674.1-207ENST00000641355 633 ntBASIC3.5□□□□□ -1.85
PRKNO60260 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PRKNO60260 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
PRKNO60260 AL356473.1-201ENST00000406203 1408 ntBASIC3.5□□□□□ -1.85
PRKNO60260 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PRKNO60260 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.5□□□□□ -1.85
PRKNO60260 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PRKNO60260 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.49□□□□□ -1.85
PRKNO60260 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PRKNO60260 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.49□□□□□ -1.85
PRKNO60260 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKNO60260 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PRKNO60260 SNORA73.2-201ENST00000364946 201 ntBASIC3.49□□□□□ -1.85
PRKNO60260 RNU5E-5P-201ENST00000365379 116 ntBASIC3.49□□□□□ -1.85
PRKNO60260 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PRKNO60260 Y_RNA.517-201ENST00000384551 106 ntBASIC3.49□□□□□ -1.85
PRKNO60260 RNU6-192P-201ENST00000391253 100 ntBASIC3.49□□□□□ -1.85
PRKNO60260 RNA5SP239-201ENST00000410218 129 ntBASIC3.49□□□□□ -1.85
PRKNO60260 RNA5SP39-201ENST00000411245 120 ntBASIC3.49□□□□□ -1.85
PRKNO60260 AC007899.1-201ENST00000412776 775 ntBASIC3.49□□□□□ -1.85
PRKNO60260 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.49□□□□□ -1.85
PRKNO60260 NANOGP6-201ENST00000429190 847 ntBASIC3.49□□□□□ -1.85
PRKNO60260 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.49□□□□□ -1.85
PRKNO60260 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.49□□□□□ -1.85
PRKNO60260 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.49□□□□□ -1.85
PRKNO60260 RPS24P1-201ENST00000438550 371 ntBASIC3.49□□□□□ -1.85
PRKNO60260 AL353748.1-201ENST00000440753 474 ntBASIC3.49□□□□□ -1.85
PRKNO60260 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.49□□□□□ -1.85
PRKNO60260 GDI2P2-201ENST00000445131 608 ntBASIC3.49□□□□□ -1.85
PRKNO60260 AL592447.1-201ENST00000447592 540 ntBASIC3.49□□□□□ -1.85
PRKNO60260 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.49□□□□□ -1.85
PRKNO60260 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.49□□□□□ -1.85
PRKNO60260 BTF3P5-201ENST00000457252 467 ntBASIC3.49□□□□□ -1.85
PRKNO60260 AC087312.1-201ENST00000471411 480 ntBASIC3.49□□□□□ -1.85
PRKNO60260 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.49□□□□□ -1.85
PRKNO60260 ARL2BPP4-201ENST00000506854 471 ntBASIC3.49□□□□□ -1.85
PRKNO60260 AC010625.1-201ENST00000511296 403 ntBASIC3.49□□□□□ -1.85
PRKNO60260 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.49□□□□□ -1.85
PRKNO60260 IGLVIV-53-201ENST00000520107 367 ntBASIC3.49□□□□□ -1.85
PRKNO60260 MTCYBP20-201ENST00000524239 1129 ntBASIC3.49□□□□□ -1.85
PRKNO60260 AC024224.1-201ENST00000538284 609 ntBASIC3.49□□□□□ -1.85
PRKNO60260 OR6C73P-201ENST00000546432 358 ntBASIC3.49□□□□□ -1.85
PRKNO60260 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
PRKNO60260 MTND1P15-201ENST00000579262 949 ntBASIC3.49□□□□□ -1.85
PRKNO60260 OR4G1P-201ENST00000588632 938 ntBASIC3.49□□□□□ -1.85
PRKNO60260 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.49□□□□□ -1.85
PRKNO60260 AC079089.3-201ENST00000603094 673 ntBASIC3.49□□□□□ -1.85
PRKNO60260 AC245389.1-201ENST00000605141 529 ntBASIC3.49□□□□□ -1.85
PRKNO60260 RNU1-30P-201ENST00000606575 163 ntBASIC3.49□□□□□ -1.85
PRKNO60260 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.49□□□□□ -1.85
PRKNO60260 AC005332.10-201ENST00000612725 619 ntBASIC3.49□□□□□ -1.85
PRKNO60260 AC112200.1-201ENST00000625015 234 ntBASIC3.49□□□□□ -1.85
PRKNO60260 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.49□□□□□ -1.85
PRKNO60260 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PRKNO60260 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKNO60260 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKNO60260 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRKNO60260 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.49□□□□□ -1.85
PRKNO60260 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PRKNO60260 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.49□□□□□ -1.85
PRKNO60260 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRKNO60260 ZNF285B-201ENST00000561698 1767 ntBASIC3.48□□□□□ -1.85
PRKNO60260 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRKNO60260 AC006378.2-201ENST00000623178 2476 ntBASIC3.48□□□□□ -1.85
PRKNO60260 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRKNO60260 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRKNO60260 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRKNO60260 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PRKNO60260 XIAPP3-201ENST00000312918 795 ntBASIC3.48□□□□□ -1.85
PRKNO60260 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRKNO60260 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRKNO60260 RNVU1-3-201ENST00000364313 161 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms