Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC000403.1-201ENST00000613696 3585 ntBASIC2.58□□□□□ -2
SGCEO43556 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.58□□□□□ -2
SGCEO43556 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
SGCEO43556 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SGCEO43556 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.58□□□□□ -2
SGCEO43556 AC138915.1-201ENST00000565427 1685 ntBASIC2.57□□□□□ -2
SGCEO43556 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.57□□□□□ -2
SGCEO43556 NUP58P1-201ENST00000502546 1738 ntBASIC2.57□□□□□ -2
SGCEO43556 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.57□□□□□ -2
SGCEO43556 MIR422A-201ENST00000362286 90 ntBASIC2.57□□□□□ -2
SGCEO43556 MIR493-201ENST00000385254 89 ntBASIC2.57□□□□□ -2
SGCEO43556 RNU6-796P-201ENST00000391086 107 ntBASIC2.57□□□□□ -2
SGCEO43556 AL138885.1-201ENST00000405921 675 ntBASIC2.57□□□□□ -2
SGCEO43556 KRR1P1-201ENST00000419430 803 ntBASIC2.57□□□□□ -2
SGCEO43556 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.57□□□□□ -2
SGCEO43556 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.57□□□□□ -2
SGCEO43556 MORF4L1P7-201ENST00000426038 703 ntBASIC2.57□□□□□ -2
SGCEO43556 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.57□□□□□ -2
SGCEO43556 TRIM60P13-201ENST00000432350 1283 ntBASIC2.57□□□□□ -2
SGCEO43556 RPL36AP6-201ENST00000435770 321 ntBASIC2.57□□□□□ -2
SGCEO43556 AC004866.2-201ENST00000438285 481 ntBASIC2.57□□□□□ -2
SGCEO43556 AC002542.1-201ENST00000440683 193 ntBASIC2.57□□□□□ -2
SGCEO43556 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.57□□□□□ -2
SGCEO43556 AL162389.1-201ENST00000449233 177 ntBASIC2.57□□□□□ -2
SGCEO43556 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.57□□□□□ -2
SGCEO43556 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.57□□□□□ -2
SGCEO43556 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.57□□□□□ -2
SGCEO43556 DSTNP2-201ENST00000504533 515 ntBASIC2.57□□□□□ -2
SGCEO43556 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.57□□□□□ -2
SGCEO43556 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.57□□□□□ -2
SGCEO43556 SLC25A15P5-201ENST00000508033 253 ntBASIC2.57□□□□□ -2
SGCEO43556 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.57□□□□□ -2
SGCEO43556 RNU6-416P-201ENST00000516265 103 ntBASIC2.57□□□□□ -2
SGCEO43556 AC025881.1-201ENST00000518851 512 ntBASIC2.57□□□□□ -2
SGCEO43556 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.57□□□□□ -2
SGCEO43556 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.57□□□□□ -2
SGCEO43556 AC022784.5-201ENST00000522241 437 ntBASIC2.57□□□□□ -2
SGCEO43556 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.57□□□□□ -2
SGCEO43556 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.57□□□□□ -2
SGCEO43556 AP001542.1-201ENST00000591314 200 ntBASIC2.57□□□□□ -2
SGCEO43556 AC020895.1-201ENST00000595362 272 ntBASIC2.57□□□□□ -2
SGCEO43556 AC010738.1-201ENST00000604970 987 ntBASIC2.57□□□□□ -2
SGCEO43556 AC019159.1-201ENST00000605094 187 ntBASIC2.57□□□□□ -2
SGCEO43556 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.57□□□□□ -2
SGCEO43556 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.57□□□□□ -2
SGCEO43556 MIR3651-201ENST00000630427 90 ntBASIC2.57□□□□□ -2
SGCEO43556 MFSD8-245ENST00000641743 948 ntBASIC2.57□□□□□ -2
SGCEO43556 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SGCEO43556 GABRG2-229ENST00000641017 3628 ntBASIC2.57□□□□□ -2
SGCEO43556 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.57□□□□□ -2
SGCEO43556 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SGCEO43556 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SGCEO43556 SNORD56.5-201ENST00000364281 72 ntBASIC2.56□□□□□ -2
SGCEO43556 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.56□□□□□ -2
SGCEO43556 AL136372.1-201ENST00000403060 228 ntBASIC2.56□□□□□ -2
SGCEO43556 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.56□□□□□ -2
SGCEO43556 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.56□□□□□ -2
SGCEO43556 AL024507.1-201ENST00000412741 274 ntBASIC2.56□□□□□ -2
SGCEO43556 AL158825.1-201ENST00000414735 521 ntBASIC2.56□□□□□ -2
SGCEO43556 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.56□□□□□ -2
SGCEO43556 AC112492.1-201ENST00000449607 712 ntBASIC2.56□□□□□ -2
SGCEO43556 AC009961.3-201ENST00000449832 765 ntBASIC2.56□□□□□ -2
SGCEO43556 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.56□□□□□ -2
SGCEO43556 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.56□□□□□ -2
SGCEO43556 AP000705.1-201ENST00000454567 350 ntBASIC2.56□□□□□ -2
SGCEO43556 AC027673.1-201ENST00000456245 405 ntBASIC2.56□□□□□ -2
SGCEO43556 AL359385.1-201ENST00000456509 365 ntBASIC2.56□□□□□ -2
SGCEO43556 MTCO3P2-201ENST00000457365 171 ntBASIC2.56□□□□□ -2
SGCEO43556 RPL21P41-201ENST00000459863 264 ntBASIC2.56□□□□□ -2
SGCEO43556 NAP1L1P3-201ENST00000462291 880 ntBASIC2.56□□□□□ -2
SGCEO43556 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.56□□□□□ -2
SGCEO43556 RPL9P33-201ENST00000484311 566 ntBASIC2.56□□□□□ -2
SGCEO43556 RNU6-1095P-201ENST00000516148 108 ntBASIC2.56□□□□□ -2
SGCEO43556 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.56□□□□□ -2
SGCEO43556 AC087373.1-201ENST00000524920 491 ntBASIC2.56□□□□□ -2
SGCEO43556 OR7K1P-201ENST00000546439 926 ntBASIC2.56□□□□□ -2
SGCEO43556 AC034105.3-201ENST00000565294 442 ntBASIC2.56□□□□□ -2
SGCEO43556 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.56□□□□□ -2
SGCEO43556 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
SGCEO43556 MIR5195-201ENST00000583555 115 ntBASIC2.56□□□□□ -2
SGCEO43556 SNORD39.3-201ENST00000584451 71 ntBASIC2.56□□□□□ -2
SGCEO43556 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.56□□□□□ -2
SGCEO43556 BNIP3P33-201ENST00000598912 569 ntBASIC2.56□□□□□ -2
SGCEO43556 AC015871.2-201ENST00000603605 948 ntBASIC2.56□□□□□ -2
SGCEO43556 HSPE1P7-201ENST00000604681 321 ntBASIC2.56□□□□□ -2
SGCEO43556 AC012468.1-201ENST00000604888 430 ntBASIC2.56□□□□□ -2
SGCEO43556 CYCSP41-201ENST00000616920 296 ntBASIC2.56□□□□□ -2
SGCEO43556 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.56□□□□□ -2
SGCEO43556 MIR8057-201ENST00000620957 69 ntBASIC2.56□□□□□ -2
SGCEO43556 AC002064.3-201ENST00000623448 346 ntBASIC2.56□□□□□ -2
SGCEO43556 AC009039.2-201ENST00000624524 529 ntBASIC2.56□□□□□ -2
SGCEO43556 AC132825.7-201ENST00000638744 335 ntBASIC2.56□□□□□ -2
SGCEO43556 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.56□□□□□ -2
SGCEO43556 AC073346.2-201ENST00000624724 2058 ntBASIC2.56□□□□□ -2
SGCEO43556 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SGCEO43556 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SGCEO43556 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SGCEO43556 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.55□□□□□ -2
SGCEO43556 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SGCEO43556 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms