Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SRGAP3O43295 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SRGAP3O43295 BTBD10P1-201ENST00000549824 1352 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SRGAP3O43295 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SRGAP3O43295 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SRGAP3O43295 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SRGAP3O43295 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SRGAP3O43295 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SRGAP3O43295 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SRGAP3O43295 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SRGAP3O43295 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.25□□□□□ -1.57
SRGAP3O43295 SNORA70.2-201ENST00000364506 135 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SRGAP3O43295 AC068050.1-201ENST00000394891 380 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 OR51AB1P-201ENST00000429046 620 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 AL365400.1-201ENST00000431854 640 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.25□□□□□ -1.57
SRGAP3O43295 AC091390.1-201ENST00000433904 331 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.25□□□□□ -1.57
SRGAP3O43295 AF213884.1-201ENST00000488102 463 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.25□□□□□ -1.57
SRGAP3O43295 TMEM251P1-201ENST00000503717 318 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SRGAP3O43295 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.25□□□□□ -1.57
SRGAP3O43295 AC099522.1-202ENST00000514718 367 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 Vault.3-201ENST00000516676 95 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.25□□□□□ -1.57
SRGAP3O43295 AC090312.1-201ENST00000580637 348 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 AC017100.2-201ENST00000584628 355 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 VN1R80P-201ENST00000597126 338 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.25□□□□□ -1.57
SRGAP3O43295 AC243960.4-201ENST00000600532 288 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SRGAP3O43295 MIR8059-201ENST00000620427 81 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SRGAP3O43295 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SRGAP3O43295 AL133243.3-201ENST00000617415 3004 ntBASIC5.25□□□□□ -1.57
SRGAP3O43295 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.25□□□□□ -1.57
SRGAP3O43295 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.25□□□□□ -1.57
SRGAP3O43295 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.24□□□□□ -1.57
SRGAP3O43295 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SRGAP3O43295 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SRGAP3O43295 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SRGAP3O43295 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SRGAP3O43295 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SRGAP3O43295 RNU6-984P-201ENST00000363236 109 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 RNU6-456P-201ENST00000384493 107 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.24□□□□□ -1.57
SRGAP3O43295 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SRGAP3O43295 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.24□□□□□ -1.57
SRGAP3O43295 PDSS1P1-201ENST00000422953 1114 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 MTND2P23-201ENST00000422990 651 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AC018644.1-201ENST00000429934 551 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.24□□□□□ -1.57
SRGAP3O43295 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.24□□□□□ -1.57
SRGAP3O43295 PPIAP21-201ENST00000464473 501 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SRGAP3O43295 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SRGAP3O43295 SUMO2P4-201ENST00000504193 276 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 RNA5SP360-201ENST00000516555 118 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AC022616.6-201ENST00000520479 119 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.24□□□□□ -1.57
SRGAP3O43295 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.24□□□□□ -1.57
SRGAP3O43295 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AL389895.1-201ENST00000554127 252 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AC025884.1-201ENST00000556034 378 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 PARP1P2-201ENST00000556806 195 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 MIR4675-201ENST00000577898 77 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AC007687.1-201ENST00000602704 304 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AL365204.3-201ENST00000612448 685 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AC002550.2-201ENST00000621246 394 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AC024940.5-201ENST00000622889 474 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AC010149.2-201ENST00000637608 315 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 MIR1302-1-201ENST00000637932 143 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 AC100810.6-201ENST00000638068 285 ntBASIC5.24□□□□□ -1.57
SRGAP3O43295 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.24□□□□□ -1.57
SRGAP3O43295 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.24□□□□□ -1.57
SRGAP3O43295 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SRGAP3O43295 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SRGAP3O43295 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SRGAP3O43295 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.23□□□□□ -1.57
SRGAP3O43295 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SRGAP3O43295 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SRGAP3O43295 USP9YP4-201ENST00000424401 1745 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 CKAP2P1-201ENST00000555477 2049 ntBASIC5.23□□□□□ -1.57
SRGAP3O43295 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.23□□□□□ -1.57
SRGAP3O43295 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms