Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL139811.1-201ENST00000424779 2299 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 XPOTP1-201ENST00000443317 2398 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 Y_RNA.294-201ENST00000364916 102 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AC019155.1-201ENST00000382242 574 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AL353597.2-202ENST00000434901 373 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AC105402.2-201ENST00000438503 358 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 PPP1R2P5-201ENST00000457256 603 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 RNU7-170P-201ENST00000459303 61 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 RPL23AP14-201ENST00000468281 468 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A5A8TX70 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A5A8TX70 AC123904.3-201ENST00000547218 814 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A5A8TX70 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL6A5A8TX70 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
COL6A5A8TX70 AC022336.2-201ENST00000568966 2538 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
COL6A5A8TX70 Y_RNA.393-201ENST00000383936 102 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 RNU6-882P-201ENST00000391025 103 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 RPS15AP6-201ENST00000420703 385 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AL022400.1-201ENST00000423946 935 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AC104332.2-201ENST00000429959 156 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 RPS7P2-201ENST00000435134 607 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A5A8TX70 AC009237.8-201ENST00000445492 379 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AC007182.2-201ENST00000489251 402 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AC008526.1-201ENST00000509149 338 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.64□□□□□ -2.15
COL6A5A8TX70 MIR3683-201ENST00000580847 82 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AC011712.1-201ENST00000588959 234 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AL137072.1-201ENST00000603444 466 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 AL451074.6-201ENST00000608512 729 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 FRG1DP-201ENST00000635586 771 ntBASIC1.64□□□□□ -2.15
COL6A5A8TX70 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
COL6A5A8TX70 AC007342.9-201ENST00000623877 1385 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL6A5A8TX70 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL6A5A8TX70 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
COL6A5A8TX70 RAD1P1-201ENST00000231383 813 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.63□□□□□ -2.15
COL6A5A8TX70 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.63□□□□□ -2.15
COL6A5A8TX70 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.63□□□□□ -2.15
COL6A5A8TX70 SNORD13-201ENST00000459299 104 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.63□□□□□ -2.15
COL6A5A8TX70 HIGD1AP10-201ENST00000527837 282 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.63□□□□□ -2.15
COL6A5A8TX70 AC012360.2-201ENST00000609349 391 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 AL356266.1-201ENST00000623311 483 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 CU459211.1-201ENST00000635667 749 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL6A5A8TX70 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL6A5A8TX70 RNA5SP457-201ENST00000363657 124 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 SNORD6-201ENST00000365444 73 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 AC004965.1-201ENST00000413033 213 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.63□□□□□ -2.15
COL6A5A8TX70 RPL31P2-201ENST00000413849 377 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 HMGB3P23-201ENST00000414981 585 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 AC023128.2-201ENST00000420880 1223 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 AC005534.2-201ENST00000431047 433 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL6A5A8TX70 RNA5SP102-201ENST00000516865 106 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 AC093331.1-201ENST00000521474 169 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 AP000857.1-201ENST00000532151 543 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 AC007536.1-201ENST00000533382 349 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 AL391646.1-201ENST00000603860 190 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.63□□□□□ -2.15
COL6A5A8TX70 AC093591.3-201ENST00000634516 308 ntBASIC1.63□□□□□ -2.15
COL6A5A8TX70 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL6A5A8TX70 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL6A5A8TX70 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 SNORA31-201ENST00000362607 130 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 RNA5SP62-201ENST00000363457 110 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AIMP1P1-201ENST00000418670 937 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AL390023.1-201ENST00000428836 262 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC092427.1-202ENST00000430569 476 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AL606490.7-201ENST00000433136 191 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC009969.1-201ENST00000438726 172 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 TOMM22P6-201ENST00000465035 409 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 HMGN1P7-201ENST00000491722 313 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC108078.1-201ENST00000508073 725 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 TXNP6-201ENST00000510190 310 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC025260.1-201ENST00000548858 430 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC008568.2-201ENST00000623862 2313 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL6A5A8TX70 OR5H15-201ENST00000383696 930 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AL590004.2-201ENST00000404787 371 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 HMGB1P27-201ENST00000431429 603 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 HSPE1P28-201ENST00000443139 211 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms