Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RPS7P5-201ENST00000441482 581 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 AC007182.2-201ENST00000489251 402 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 USP9YP5-201ENST00000511770 630 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 WISP1-OT1-201ENST00000602893 642 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 AC091834.1-201ENST00000614543 472 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 API5P2-201ENST00000397055 1498 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 MIR181B1-201ENST00000385240 110 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 AL023807.1-201ENST00000407932 359 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 RNU4-74P-201ENST00000411280 161 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 AL358075.3-201ENST00000426289 226 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 FO393414.1-201ENST00000428697 1184 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 IFNWP4-201ENST00000453148 294 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 RPL23AP63-201ENST00000498752 471 ntBASIC1.99□□□□□ -2.09
CNOT1A5YKK6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.99□□□□□ -2.09
CNOT1A5YKK6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 AC009237.2-201ENST00000421358 284 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 RNU1-123P-201ENST00000458950 160 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 RPS15AP17-201ENST00000470598 390 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 AC135999.1-201ENST00000478962 479 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 RPL21P5-201ENST00000554662 472 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 AL359198.2-201ENST00000611836 194 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 U6.98-201ENST00000637157 84 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 Y_RNA.251-201ENST00000364551 99 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 RNU6-328P-201ENST00000390887 106 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 RPL7P53-201ENST00000421245 739 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 Z73417.1-201ENST00000447373 778 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 AL049830.2-201ENST00000480072 201 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 AC092185.1-201ENST00000491371 97 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 AC093767.1-201ENST00000504523 156 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 OR4R2P-201ENST00000530815 597 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.98□□□□□ -2.09
CNOT1A5YKK6 AC002076.2-201ENST00000617362 122 ntBASIC1.98□□□□□ -2.09
CNOT1A5YKK6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.97□□□□□ -2.09
CNOT1A5YKK6 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.97□□□□□ -2.09
CNOT1A5YKK6 NCSTNP1-201ENST00000406229 144 ntBASIC1.97□□□□□ -2.09
CNOT1A5YKK6 RPL23AP39-201ENST00000415533 405 ntBASIC1.97□□□□□ -2.09
CNOT1A5YKK6 AL356806.1-201ENST00000422524 916 ntBASIC1.97□□□□□ -2.09
CNOT1A5YKK6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.97□□□□□ -2.09
CNOT1A5YKK6 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.97□□□□□ -2.09
CNOT1A5YKK6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.97□□□□□ -2.09
CNOT1A5YKK6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.97□□□□□ -2.09
CNOT1A5YKK6 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.97□□□□□ -2.09
CNOT1A5YKK6 AC108479.2-201ENST00000617314 601 ntBASIC1.97□□□□□ -2.09
CNOT1A5YKK6 AP006248.2-201ENST00000623309 592 ntBASIC1.97□□□□□ -2.09
CNOT1A5YKK6 KPNA2P1-201ENST00000458289 1591 ntBASIC1.97□□□□□ -2.09
CNOT1A5YKK6 AC008432.1-201ENST00000615912 1320 ntBASIC1.97□□□□□ -2.09
CNOT1A5YKK6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CNOT1A5YKK6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.97□□□□□ -2.09
CNOT1A5YKK6 AC011978.2-201ENST00000569835 2054 ntBASIC1.97□□□□□ -2.09
CNOT1A5YKK6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
CNOT1A5YKK6 Y_RNA.30-201ENST00000362572 97 ntBASIC1.96□□□□□ -2.09
CNOT1A5YKK6 RNU1-51P-201ENST00000365345 176 ntBASIC1.96□□□□□ -2.09
CNOT1A5YKK6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.96□□□□□ -2.09
CNOT1A5YKK6 SNORD13-201ENST00000459299 104 ntBASIC1.96□□□□□ -2.09
CNOT1A5YKK6 MTND3P6-201ENST00000485242 339 ntBASIC1.96□□□□□ -2.09
CNOT1A5YKK6 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.96□□□□□ -2.09
CNOT1A5YKK6 NAMPTP2-201ENST00000505629 1115 ntBASIC1.96□□□□□ -2.09
CNOT1A5YKK6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.96□□□□□ -2.09
CNOT1A5YKK6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.96□□□□□ -2.09
CNOT1A5YKK6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.96□□□□□ -2.09
CNOT1A5YKK6 AC025281.1-201ENST00000567026 265 ntBASIC1.96□□□□□ -2.09
CNOT1A5YKK6 AC005951.1-201ENST00000576706 485 ntBASIC1.96□□□□□ -2.09
CNOT1A5YKK6 AC120053.1-201ENST00000607706 736 ntBASIC1.96□□□□□ -2.09
CNOT1A5YKK6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.96□□□□□ -2.1
CNOT1A5YKK6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC1.96□□□□□ -2.1
CNOT1A5YKK6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.96□□□□□ -2.1
CNOT1A5YKK6 SNORA48.3-201ENST00000391081 134 ntBASIC1.96□□□□□ -2.1
CNOT1A5YKK6 TRIM60P13-201ENST00000432350 1283 ntBASIC1.96□□□□□ -2.1
CNOT1A5YKK6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.96□□□□□ -2.1
CNOT1A5YKK6 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.96□□□□□ -2.1
CNOT1A5YKK6 AC243772.1-201ENST00000451620 410 ntBASIC1.96□□□□□ -2.1
CNOT1A5YKK6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CNOT1A5YKK6 RN7SKP40-201ENST00000517211 242 ntBASIC1.96□□□□□ -2.1
CNOT1A5YKK6 HMGN2P28-201ENST00000606102 262 ntBASIC1.96□□□□□ -2.1
CNOT1A5YKK6 BX664608.1-201ENST00000610519 487 ntBASIC1.96□□□□□ -2.1
CNOT1A5YKK6 AC093591.3-201ENST00000634516 308 ntBASIC1.96□□□□□ -2.1
CNOT1A5YKK6 MTND5P3-201ENST00000438536 1800 ntBASIC1.96□□□□□ -2.1
CNOT1A5YKK6 XIAPP3-201ENST00000312918 795 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms