Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 PGBD4P3-201ENST00000440731 581 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 PDSS1P2-201ENST00000449397 678 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 Z82190.1-201ENST00000454534 490 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 SNRPFP4-201ENST00000456366 242 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC104849.1-201ENST00000462623 405 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 RPL30P9-201ENST00000465586 330 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 GAPDHP39-201ENST00000481866 979 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC016687.1-201ENST00000482574 353 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC090013.1-201ENST00000485147 480 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC110768.1-201ENST00000509222 400 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 SNORA19.2-201ENST00000516013 114 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 OR5M7P-201ENST00000526140 972 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC011611.1-201ENST00000552179 197 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 BNIP3P23-201ENST00000599655 511 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC113139.1-201ENST00000605049 239 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC024560.3-201ENST00000608482 349 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 YWHAEP7-203ENST00000622054 312 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC138393.1-206ENST00000540997 1886 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 ERCC6-202ENST00000374127 1782 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AP002907.1-201ENST00000606361 1430 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC104260.2-201ENST00000623551 3497 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RPL21P132-201ENST00000331267 462 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RNU6-31P-201ENST00000384388 108 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RN7SKP284-201ENST00000411002 343 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RABEPKP1-201ENST00000440529 1026 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 DYNLL1P6-201ENST00000503440 264 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC021146.2-201ENST00000504736 556 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RNA5SP360-201ENST00000516555 118 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AP005597.4-201ENST00000526762 229 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC020661.2-201ENST00000560114 134 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 NIFKP8-201ENST00000560500 874 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC010653.1-201ENST00000571108 881 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC020914.6-201ENST00000594327 272 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 NRBF2P5-201ENST00000603087 788 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 ZNF37BP-203ENST00000452306 1352 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC083843.2-201ENST00000568248 6253 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 Y_RNA.159-201ENST00000363674 87 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 Y_RNA.193-201ENST00000363979 102 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 SNORA33.2-201ENST00000365413 134 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RNU6-1263P-201ENST00000384601 106 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 MIR34B-201ENST00000385076 84 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 U3.23-201ENST00000391132 200 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RNU2-47P-201ENST00000410649 186 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RN7SKP159-201ENST00000410657 292 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 FCF1P1-201ENST00000432690 571 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 BTF3P15-201ENST00000455606 336 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 CEACAMP4-201ENST00000457676 421 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 UBE2DNL-203ENST00000474922 222 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RN7SL429P-201ENST00000479090 223 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC073522.1-201ENST00000483312 377 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RN7SL489P-201ENST00000486185 223 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RN7SL327P-201ENST00000488659 223 ntBASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.13□□□□□ -1.91
NOTCH3Q9UM47 RN7SL853P-201ENST00000617250 223 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms