Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 MTND1P22-201ENST00000510572 951 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 FTH1P9-201ENST00000513251 355 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 RNU6-1095P-201ENST00000516148 108 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 RNU6-232P-201ENST00000517144 64 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 MTND2P38-201ENST00000522536 667 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC007991.1-201ENST00000522680 631 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 MED28P5-201ENST00000528254 438 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AP004242.1-201ENST00000533701 349 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC011602.1-201ENST00000546484 331 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC087481.2-201ENST00000565492 330 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC244505.7-201ENST00000599675 272 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AL590392.1-201ENST00000604960 446 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 MIR6875-201ENST00000617506 72 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AL713922.2-201ENST00000619384 716 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC112200.1-201ENST00000625015 234 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC099063.3-201ENST00000642066 185 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AP001350.1-201ENST00000601906 1524 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC004925.1-201ENST00000624256 2706 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC068538.1-201ENST00000376856 336 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 PPIAP31-201ENST00000405422 495 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 RNU6-55P-201ENST00000411092 107 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 RNU6-954P-201ENST00000411355 107 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 RPL23AP39-201ENST00000415533 405 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AL365203.2-201ENST00000423444 196 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC010401.1-201ENST00000463867 348 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 BZW1P2-201ENST00000473537 826 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 RPL31P13-201ENST00000484151 370 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC109635.4-202ENST00000531666 412 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC018630.1-201ENST00000541376 925 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC084824.1-201ENST00000550917 1005 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC007954.1-201ENST00000554198 494 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC012182.1-201ENST00000570133 895 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC119501.1-201ENST00000603646 475 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 DUXAP11-201ENST00000603858 526 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC008121.2-201ENST00000614647 523 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AL603755.1-201ENST00000619504 163 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 AC068057.2-201ENST00000624047 895 ntBASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIMA1Q9UHB6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
LIMA1Q9UHB6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.9□□□□□ -1.78
LIMA1Q9UHB6 USP8P1-201ENST00000494673 3183 ntBASIC3.9□□□□□ -1.78
LIMA1Q9UHB6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
LIMA1Q9UHB6 RNU6-744P-201ENST00000365557 107 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 RNU6-1181P-201ENST00000384191 106 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 RNU6-1316P-201ENST00000384242 108 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 RN7SKP266-201ENST00000410232 287 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 RN7SKP53-201ENST00000411337 315 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AC017079.2-201ENST00000416102 485 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 RPL36AP36-201ENST00000418616 301 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 MTND2P18-201ENST00000419962 1030 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 USP9YP26-201ENST00000421008 661 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 LSM1P1-201ENST00000438629 273 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 RPS3AP46-201ENST00000448352 682 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 snoU13.24-201ENST00000458998 104 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 RN7SL594P-201ENST00000470590 287 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AC021205.2-201ENST00000480069 347 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 VN1R105P-201ENST00000486595 910 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 RPL23AP55-201ENST00000498163 452 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms