Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC099563.1-201ENST00000456086 418 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 ST13P14-201ENST00000474095 734 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 AC006390.1-201ENST00000508068 283 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 STMN1P2-201ENST00000508435 439 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 RN7SKP298-201ENST00000515950 94 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 TRMT10BP1-201ENST00000519377 943 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 CYCSP30-201ENST00000546447 172 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 AC107954.1-201ENST00000565906 727 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 ZNF415P1-201ENST00000582279 1166 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 NDUFA8P1-201ENST00000605525 367 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 AC138749.5-201ENST00000611461 208 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 AC116165.2-201ENST00000616705 206 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 CR381572.1-201ENST00000625098 102 ntBASIC4.45□□□□□ -1.7
COL20A1Q9P218 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COL20A1Q9P218 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL20A1Q9P218 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL20A1Q9P218 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL20A1Q9P218 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL20A1Q9P218 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL20A1Q9P218 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL20A1Q9P218 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 FRG1BP-201ENST00000278882 761 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 SNORA71.3-201ENST00000362582 128 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 Y_RNA.517-201ENST00000384551 106 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 MIR670-201ENST00000390142 98 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 PTMAP2-201ENST00000397627 327 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 AL590704.1-201ENST00000402856 794 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 SNORA3C-201ENST00000408792 125 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 Y_RNA.608-201ENST00000410647 95 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 AL031779.1-201ENST00000415663 330 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 UBE2V1P13-201ENST00000436983 439 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 RANP8-201ENST00000444720 713 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 ELOCP30-201ENST00000447108 299 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC098824.1-201ENST00000453565 980 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 RPS20P32-201ENST00000456044 356 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL20A1Q9P218 ACTR3P3-201ENST00000480448 893 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 RN7SL271P-201ENST00000487601 295 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC017037.1-201ENST00000508460 471 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 RNA5SP143-201ENST00000516936 115 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 AP003392.2-201ENST00000527269 208 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC005951.1-201ENST00000576706 485 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC091805.2-201ENST00000603848 235 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC004853.1-201ENST00000604902 698 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 RNA5SP108-201ENST00000605921 117 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC131902.3-201ENST00000611767 581 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC008250.2-201ENST00000615261 205 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 AP001506.1-201ENST00000615444 211 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC040168.1-201ENST00000623594 991 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.44□□□□□ -1.7
COL20A1Q9P218 AC027290.2-201ENST00000623210 18662 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 MTND5P29-201ENST00000458676 1807 ntBASIC4.44□□□□□ -1.7
COL20A1Q9P218 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL20A1Q9P218 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL20A1Q9P218 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL20A1Q9P218 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL20A1Q9P218 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 RNU6-837P-201ENST00000391056 108 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 RNU6-648P-201ENST00000410190 107 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 AL359704.1-201ENST00000411586 781 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 RPL7AP73-201ENST00000413490 353 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 AL139247.1-201ENST00000422768 325 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 USP9YP14-201ENST00000430663 563 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC091862.1-201ENST00000438016 1100 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL20A1Q9P218 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms