Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.66□□□□□ -1.98
VAPAQ9P0L0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
VAPAQ9P0L0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 RNU1-109P-201ENST00000383960 147 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 RNVU1-14-201ENST00000384770 164 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 MIR493-201ENST00000385254 89 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 RNA5SP252-201ENST00000391131 119 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 MTND4P13-201ENST00000402078 1023 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 CYCSP45-201ENST00000402289 315 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 AL121978.1-201ENST00000402778 359 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 RPS3AP25-201ENST00000411660 793 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 RPL23AP58-201ENST00000440453 469 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 RPL23AP16-201ENST00000441715 421 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 AC112653.1-201ENST00000443851 386 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 NIPA2P5-201ENST00000452282 464 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 AC093767.1-201ENST00000504523 156 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 HMGB1P1-201ENST00000522557 636 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 MTCO3P13-201ENST00000577757 781 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 CR381653.2-201ENST00000624041 768 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 SGO1P1-201ENST00000603525 1447 ntBASIC2.65□□□□□ -1.99
VAPAQ9P0L0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VAPAQ9P0L0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 MIR26A1-201ENST00000362205 77 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 RNU6-650P-201ENST00000365658 111 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 RNU6-1027P-201ENST00000383998 107 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 MIR16-1-201ENST00000385271 89 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 SNORD65C-201ENST00000390962 71 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 SNORA48.5-201ENST00000391143 135 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 U3.29-201ENST00000391296 212 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 ATP5F1P3-201ENST00000397213 657 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AC246680.2-201ENST00000422106 389 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 MTND4LP10-201ENST00000435146 291 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AL590664.1-201ENST00000448065 339 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 TPRKBP1-201ENST00000456243 481 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 SNORA84-201ENST00000459229 133 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 RPL21P47-201ENST00000483696 477 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 RPL21P131-201ENST00000497298 483 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AC010468.3-201ENST00000508225 458 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AC091826.1-201ENST00000514065 313 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 RNU6-27P-201ENST00000516146 107 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 ELOCP31-201ENST00000540463 467 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 EEF1B2P4-201ENST00000551398 348 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AC125611.2-201ENST00000551907 647 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 MED28P6-201ENST00000558776 231 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 ZNF861P-201ENST00000588126 639 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AL353748.2-201ENST00000622148 471 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 NUP58P1-201ENST00000502546 1738 ntBASIC2.64□□□□□ -1.99
VAPAQ9P0L0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VAPAQ9P0L0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 RNU6-799P-201ENST00000363567 107 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AL512633.1-201ENST00000399931 655 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 UBE2V1P15-201ENST00000407776 448 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 RPS15AP38-201ENST00000413110 372 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 MTCO1P39-201ENST00000426148 480 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 NIPA2P1-201ENST00000426223 976 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 RPL31P54-201ENST00000429803 370 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AL050321.1-201ENST00000432363 400 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 ELOCP3-201ENST00000439303 348 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 MTND2P3-201ENST00000452458 470 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 MTCO3P2-201ENST00000457365 171 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 RPS29P12-201ENST00000460178 152 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 RN7SL807P-201ENST00000470923 297 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 RPL32P34-201ENST00000486380 400 ntBASIC2.63□□□□□ -1.99
VAPAQ9P0L0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VAPAQ9P0L0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms