Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AC011460.1-201ENST00000636268 1834 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 RNU6-799P-201ENST00000363567 107 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AC016769.3-201ENST00000396562 315 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 ATG3P1-201ENST00000419507 911 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 GTF2IP23-201ENST00000423746 351 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AC093663.1-201ENST00000497190 394 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AC114967.1-201ENST00000504890 259 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 BOLA3P3-201ENST00000505182 232 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AC068657.1-201ENST00000520807 306 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AC005476.1-201ENST00000554427 397 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 MTCYBP27-201ENST00000555160 670 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 GTF2IP8-201ENST00000560687 584 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 FAM60BP-201ENST00000578364 658 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AL162713.1-201ENST00000604480 262 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AC005000.2-201ENST00000605468 310 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AC068880.4-201ENST00000623082 495 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 CYP3A51P-201ENST00000633513 256 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 MTCO1P23-201ENST00000415223 1526 ntBASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.01□□□□□ -1.93
KLHL28Q9NXS3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3□□□□□ -1.93
KLHL28Q9NXS3 RNU1-70P-201ENST00000362618 164 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 Y_RNA.110-201ENST00000363220 99 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 SNORD51-201ENST00000384320 80 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 RPS4XP3-201ENST00000398541 413 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 MTCO3P1-205ENST00000422088 832 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 SAR1AP4-201ENST00000429225 591 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC104332.2-201ENST00000429959 156 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC091862.1-201ENST00000438016 1100 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 ATP5C1P1-201ENST00000441945 895 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 RPS29P12-201ENST00000460178 152 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 KLRA1P-201ENST00000503499 986 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC021146.5-201ENST00000503544 545 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 SNORA48.10-201ENST00000516965 160 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC008127.2-201ENST00000549925 1075 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 HIGD1AP1-201ENST00000550979 275 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 AL136520.1-202ENST00000555494 763 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC090330.1-201ENST00000588646 764 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC073657.2-201ENST00000605661 303 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC107294.3-201ENST00000609211 526 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 MIR7112-201ENST00000616126 65 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AP000676.4-201ENST00000624659 623 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC080188.3-201ENST00000624842 748 ntBASIC3□□□□□ -1.93
KLHL28Q9NXS3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3□□□□□ -1.93
KLHL28Q9NXS3 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 SNORA48.2-201ENST00000390926 124 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 TAF9BP1-201ENST00000396646 746 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 ARF4P3-201ENST00000397387 509 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AL031121.1-201ENST00000406553 254 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 U3.42-201ENST00000408746 214 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 RPS15AP38-201ENST00000413110 372 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 MTCO1P39-201ENST00000426148 480 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 RPL23AP58-201ENST00000440453 469 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AL590664.1-201ENST00000448065 339 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 COX6CP18-201ENST00000448769 222 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 DYNLL1P6-201ENST00000503440 264 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AC006390.1-201ENST00000508068 283 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 RNU5A-7P-201ENST00000515979 116 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 RNU6-56P-201ENST00000516986 93 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms