Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 USP9YP22-201ENST00000438971 294 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC092641.1-201ENST00000440229 772 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AL353691.1-201ENST00000451332 387 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 PRSS3P4-201ENST00000453323 162 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC010099.1-201ENST00000455434 375 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 RPL7P49-201ENST00000471402 708 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 RPL30P5-201ENST00000494923 336 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC090453.1-201ENST00000495560 436 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC016550.1-201ENST00000505348 785 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC109464.2-201ENST00000510242 943 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 RNU6-1028P-201ENST00000517164 93 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC087808.1-201ENST00000520501 361 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC103783.1-201ENST00000520506 373 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 HSPA8P13-201ENST00000523715 472 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC103843.2-201ENST00000530523 682 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC034268.2-201ENST00000571784 482 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 RN7SL339P-201ENST00000580597 296 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC006077.1-201ENST00000604746 343 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC004853.1-201ENST00000604902 698 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 BNIP3P19-201ENST00000605397 577 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC069545.1-201ENST00000605671 358 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC124016.2-201ENST00000610058 665 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC025588.4-201ENST00000615802 908 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AL512427.1-201ENST00000618593 349 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC090772.4-201ENST00000623599 362 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AC120349.2-201ENST00000625002 298 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AP003485.1-201ENST00000625093 753 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 AL732372.2-225ENST00000642124 456 ntBASIC3.3□□□□□ -1.88
HPF1Q9NWY4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HPF1Q9NWY4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 GABRG2-229ENST00000641017 3628 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 MTCO1P56-201ENST00000401674 224 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 RPS3AP24-201ENST00000407896 734 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AL450338.1-201ENST00000407987 512 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC019070.1-201ENST00000415008 1024 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 GTF2IP7-202ENST00000436677 309 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 CYCSP35-201ENST00000451978 304 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC234775.1-201ENST00000454247 670 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 RPL6P9-201ENST00000466502 859 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC092185.1-201ENST00000491371 97 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC021146.5-201ENST00000503544 545 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC022861.1-201ENST00000522981 663 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 CASP1P1-201ENST00000526345 212 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 MIR3922-201ENST00000585192 84 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 BNIP3P22-201ENST00000593399 556 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 KLKP1-201ENST00000595979 403 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC004777.1-201ENST00000624317 287 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AC244258.1-201ENST00000637553 1071 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 AL392088.2-201ENST00000637607 285 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 PWAR6-201ENST00000552334 4618 ntBASIC3.29□□□□□ -1.88
HPF1Q9NWY4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.29□□□□□ -1.88
HPF1Q9NWY4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 AP005901.5-201ENST00000545779 1796 ntBASIC3.28□□□□□ -1.88
HPF1Q9NWY4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 AC058791.1-201ENST00000608412 3198 ntBASIC3.28□□□□□ -1.88
HPF1Q9NWY4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 RNA5SP50-201ENST00000363731 107 ntBASIC3.28□□□□□ -1.88
HPF1Q9NWY4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 USP9YP21-201ENST00000420603 432 ntBASIC3.28□□□□□ -1.88
HPF1Q9NWY4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 RN7SL293P-201ENST00000481765 281 ntBASIC3.28□□□□□ -1.88
HPF1Q9NWY4 AC069528.1-202ENST00000482888 637 ntBASIC3.28□□□□□ -1.88
HPF1Q9NWY4 TMEM251P1-201ENST00000503717 318 ntBASIC3.28□□□□□ -1.88
HPF1Q9NWY4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.28□□□□□ -1.88
HPF1Q9NWY4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms