Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC104850.1-201ENST00000435940 476 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 HLA-N-201ENST00000437516 135 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 FTH1P1-201ENST00000437933 532 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC079448.1-201ENST00000449377 373 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 FABP3P2-201ENST00000453169 399 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC108059.3-201ENST00000456388 214 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC114967.1-201ENST00000504890 259 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 HMGB1P29-201ENST00000505659 499 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 OR51K1P-201ENST00000510214 950 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 RNU6-798P-201ENST00000516912 103 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC103783.1-201ENST00000520506 373 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC107934.1-201ENST00000522215 217 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 PHBP17-201ENST00000528576 541 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AL845331.3-202ENST00000562856 261 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC079587.1-201ENST00000603846 277 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC010680.3-201ENST00000604215 520 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 OR6R2P-201ENST00000609216 300 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AL031666.3-201ENST00000609320 1006 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC024941.1-201ENST00000612250 334 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AL161637.1-201ENST00000622380 412 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC067931.1-201ENST00000624190 671 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 AC124864.2-201ENST00000624736 186 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 MIR6863-201ENST00000636112 90 ntBASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM54Q9BYV2 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 RNU5E-1-201ENST00000362477 120 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 RNU5A-8P-201ENST00000364102 114 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 RNY1P12-201ENST00000364251 105 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 RNA5SP175-201ENST00000364275 119 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 RNY4P16-201ENST00000364768 94 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 U3.15-201ENST00000365398 212 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AL133412.1-201ENST00000380194 2992 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 RPL17P50-201ENST00000396131 546 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 RNU4-55P-201ENST00000410731 137 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 MTND1P21-201ENST00000412991 285 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 MTND3P17-201ENST00000416968 344 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 RBMY1KP-201ENST00000423480 476 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 DPPA2P1-201ENST00000428060 556 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AL451074.3-201ENST00000437709 472 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AC010655.1-201ENST00000449336 292 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 MTND1P12-201ENST00000455231 147 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 C1DP4-201ENST00000455429 424 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 MTCO2P29-201ENST00000465212 189 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 RPL21P126-201ENST00000470049 478 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AC007686.1-201ENST00000488511 463 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 HMGN1P28-201ENST00000521340 364 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AC124947.2-202ENST00000552735 133 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AL352979.3-201ENST00000553515 247 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 MIR4801-201ENST00000582704 82 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 KC877982.1-201ENST00000602313 470 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AC007038.2-201ENST00000608095 740 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AL391813.2-201ENST00000609113 322 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AC068944.2-201ENST00000610373 403 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 LRRC77P-213ENST00000637727 880 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 RAD17P1-201ENST00000418130 2042 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 AC011266.1-201ENST00000624119 3569 ntBASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM54Q9BYV2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms