Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 MTND3P1-201ENST00000441336 220 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 MRPS31P2-201ENST00000451581 518 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 RPL31P50-201ENST00000471002 296 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 RNU5A-4P-201ENST00000516588 111 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AP006245.1-201ENST00000522549 120 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AC103843.2-201ENST00000530523 682 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AC061975.8-201ENST00000587058 721 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 VN1R82P-201ENST00000601481 356 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AC112220.3-201ENST00000605502 502 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AL390208.1-201ENST00000605885 644 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AC069200.1-201ENST00000609511 323 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AC092106.3-201ENST00000611308 722 ntBASIC4.05□□□□□ -1.76
SDF4Q9BRK5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SDF4Q9BRK5 AF127577.6-201ENST00000623352 2191 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 PRO1804-201ENST00000623780 2050 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 SNORA63.1-201ENST00000362493 131 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 RNU6-952P-201ENST00000391164 108 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 USP9YP33-201ENST00000412220 421 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 RPL22P18-201ENST00000417197 377 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 USP9YP35-201ENST00000435696 412 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 RPL7P49-201ENST00000471402 708 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 RN7SL293P-201ENST00000481765 281 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AC020893.1-201ENST00000502452 580 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 SNORA70.18-201ENST00000516696 98 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 NDUFB9P3-201ENST00000521269 501 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AC004853.1-201ENST00000604902 698 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AC107952.2-201ENST00000606048 486 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 RMST_8.1-201ENST00000610287 165 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AL355810.1-201ENST00000614629 552 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AP000484.1-201ENST00000620067 1252 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AC022149.2-201ENST00000621061 203 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AP003355.3-201ENST00000623465 114 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 AL392088.2-201ENST00000637607 285 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 MTCO1P12-201ENST00000414273 1543 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 TNPO1P3-201ENST00000436471 2662 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 ZNF876P-202ENST00000398732 1485 ntBASIC4.04□□□□□ -1.76
SDF4Q9BRK5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SDF4Q9BRK5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 FAM133CP-201ENST00000332869 704 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 RNU6-28P-201ENST00000362378 107 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 RNA5SP44-201ENST00000410446 133 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 RNU2-47P-201ENST00000410649 186 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 AL137014.1-201ENST00000420490 1226 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 MTCYBP31-201ENST00000438855 1122 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 AL662791.1-201ENST00000441992 928 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 CYCSP35-201ENST00000451978 304 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 PRSS3P4-201ENST00000453323 162 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 AC091153.1-201ENST00000466297 402 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 NIPA2P2-201ENST00000496376 1083 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 AC091951.3-201ENST00000504093 246 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.03□□□□□ -1.76
SDF4Q9BRK5 HMGB3P15-201ENST00000507326 574 ntBASIC4.03□□□□□ -1.76
SDF4Q9BRK5 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms