Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AC068831.4-201ENST00000556118 109 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 NDUFB4P11-201ENST00000560510 395 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 MIR4444-1-201ENST00000581696 74 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AC060771.1-201ENST00000582031 164 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 MIR4444-2-201ENST00000584390 74 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AL353997.4-201ENST00000586196 166 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AL355816.1-201ENST00000607951 118 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AL158196.1-201ENST00000616786 434 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AC091925.1-201ENST00000623204 462 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AC119674.1-207ENST00000641355 633 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 DHX40P1-201ENST00000588725 1412 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 AP001350.1-201ENST00000601906 1524 ntBASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
SYNGAP1Q96PV0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 RNU4-20P-201ENST00000365601 151 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 RNY4P36-201ENST00000391116 96 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 RPL31P45-201ENST00000419532 356 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AC108059.2-201ENST00000434626 151 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AC010733.1-201ENST00000451515 401 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 TRBV26-201ENST00000456572 344 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 RPS5P7-201ENST00000456664 608 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 RPS29P15-201ENST00000458329 171 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 snoU13.24-201ENST00000458998 104 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 RPS17P2-201ENST00000461663 408 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 PLGLA-201ENST00000465668 449 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AL049714.1-201ENST00000466686 347 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 HSPD1P15-201ENST00000505573 1122 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 GLUD1P4-201ENST00000590914 418 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 MIR6853-201ENST00000619642 74 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AC019206.1-201ENST00000621938 425 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AL159972.1-201ENST00000625150 448 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 AC097063.1-201ENST00000426714 1797 ntBASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNGAP1Q96PV0 MTND5P33-201ENST00000571250 1450 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 RNU6-97P-201ENST00000363387 104 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 Y_RNA.367-201ENST00000365544 101 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 RNU6-1013P-201ENST00000384180 107 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 RNU6-193P-201ENST00000410977 107 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AC007738.1-201ENST00000413892 348 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AC092832.1-201ENST00000422934 400 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 RPL34P6-201ENST00000432390 345 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 RPL7P52-201ENST00000449200 742 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 MTND5P22-201ENST00000458380 195 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 snoU13.8-201ENST00000458890 104 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AP000893.1-201ENST00000474462 794 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 RPL12P20-201ENST00000475538 479 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AC055855.1-201ENST00000489563 579 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 Y_RNA.665-201ENST00000516177 98 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 RN7SKP92-201ENST00000517266 244 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AC007823.1-201ENST00000569932 1566 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 XIAPP1-201ENST00000603162 600 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AC243654.2-201ENST00000612843 443 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 AP005432.1-201ENST00000580891 3485 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 MUC2-202ENST00000613187 4845 ntBASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
SYNGAP1Q96PV0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms