Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RPL36AP6-201ENST00000435770 321 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 PTMAP6-201ENST00000439110 327 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 AC073850.1-201ENST00000449243 255 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 RPL36AP13-201ENST00000457490 317 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 HMGB3P15-201ENST00000507326 574 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 RNU6-273P-201ENST00000516937 96 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 AC107918.3-201ENST00000533272 382 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 AC027369.5-201ENST00000533838 755 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 AC006270.2-201ENST00000578523 652 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 PRPF19P1-201ENST00000584766 898 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 BNIP3P25-201ENST00000596023 559 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 AC025034.2-201ENST00000623264 286 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 AP002799.1-201ENST00000623552 423 ntBASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCHD1Q96NR3 MTCO1P12-201ENST00000414273 1543 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 ZNF734P-201ENST00000419494 1534 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 BDP1P-201ENST00000582658 1990 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AL442639.1-201ENST00000625030 1899 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 RNA5SP305-201ENST00000362665 119 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 Y_RNA.445-201ENST00000384168 102 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 MIR548F5-201ENST00000408421 86 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 RN7SKP114-201ENST00000410327 279 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 RNU6-516P-201ENST00000411381 104 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 RPL23AP38-201ENST00000423801 469 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC005094.1-201ENST00000440420 368 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC107399.1-201ENST00000451226 265 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 RN7SL443P-201ENST00000464331 290 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC087385.1-201ENST00000475062 312 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 RPL7AP6-201ENST00000477943 801 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 BX284632.1-201ENST00000478218 541 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 RPL7P42-201ENST00000481005 679 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AL163540.1-201ENST00000485382 386 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC004453.1-201ENST00000487895 408 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 RN7SL808P-201ENST00000496066 299 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 Y_RNA.654-201ENST00000497848 106 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC098976.1-201ENST00000513014 541 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 SETP7-201ENST00000552169 453 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC024619.4-201ENST00000580924 316 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 MIR5583-1-201ENST00000580941 59 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC124303.1-201ENST00000605703 360 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AL121655.1-201ENST00000605811 308 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AP001784.1-201ENST00000624107 428 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 IQCB2P-201ENST00000401788 1633 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 AC015813.6-201ENST00000624409 5808 ntBASIC4.82□□□□□ -1.64
PTCHD1Q96NR3 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 SNURFL-201ENST00000309296 343 ntBASIC4.81□□□□□ -1.64
PTCHD1Q96NR3 Y_RNA.145-201ENST00000363527 102 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms