Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC42Q96M95 AL158825.1-201ENST00000414735 521 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 KRR1P1-201ENST00000419430 803 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 HMGN2P30-201ENST00000423237 256 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC42Q96M95 AP000936.2-201ENST00000447151 681 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.64□□□□□ -1.99
CCDC42Q96M95 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC42Q96M95 MRPL35P4-201ENST00000453682 566 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 AC080014.1-201ENST00000496877 1201 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 AC008885.2-201ENST00000509506 930 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 AC006445.2-201ENST00000510061 472 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 AC034159.1-201ENST00000513885 583 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC42Q96M95 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC42Q96M95 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC42Q96M95 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC42Q96M95 MIR5194-201ENST00000582634 120 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 ELOCP29-201ENST00000588193 334 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 AC007619.2-201ENST00000605743 379 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 AC009570.1-201ENST00000609599 745 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 AC097372.4-201ENST00000625025 466 ntBASIC2.64□□□□□ -1.99
CCDC42Q96M95 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC42Q96M95 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC42Q96M95 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 AC123912.3-201ENST00000600907 1367 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC42Q96M95 SGO1P2-201ENST00000429458 1589 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC42Q96M95 MIR21-201ENST00000362134 72 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 RNA5SP258-201ENST00000362750 119 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 MIR23B-201ENST00000384832 97 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 MIR27B-201ENST00000385129 97 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AL356057.2-201ENST00000403318 432 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 FAT1P1-201ENST00000406588 507 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 AC006548.1-201ENST00000427470 102 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 AC104389.3-201ENST00000445629 235 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AL513328.1-201ENST00000446460 224 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 SNORD109B-201ENST00000458961 67 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 SNORD109A-201ENST00000459128 67 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 RPL23AP45-201ENST00000476406 468 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AC015908.1-201ENST00000478739 476 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AC112673.1-201ENST00000513168 575 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 SNORA31.11-201ENST00000516528 139 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AC104997.1-201ENST00000519761 717 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 COX6CP8-201ENST00000522620 226 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 C1DP5-201ENST00000525775 383 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 NBEAP1-201ENST00000554452 979 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 RPL23AP84-201ENST00000571193 464 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AC090312.2-201ENST00000582687 378 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AC106791.2-201ENST00000604680 391 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AL133507.1-201ENST00000605269 557 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AL355810.1-201ENST00000614629 552 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AC008083.4-201ENST00000615076 444 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AC007275.1-201ENST00000621243 671 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 AL360181.4-201ENST00000621752 134 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 CR381572.1-201ENST00000625098 102 ntBASIC2.63□□□□□ -1.99
CCDC42Q96M95 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CCDC42Q96M95 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CCDC42Q96M95 RNU6-819P-201ENST00000364116 107 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 RNU6-1180P-201ENST00000364935 107 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 RNU1-51P-201ENST00000365345 176 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 RNU6-152P-201ENST00000384037 107 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 PTP4A1P3-201ENST00000433661 420 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 MTCYBP34-201ENST00000439552 670 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 OR51B8P-201ENST00000449892 769 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 RNA5SP310-201ENST00000459084 116 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 AC090543.1-201ENST00000492168 485 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 DSTNP2-201ENST00000504533 515 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC42Q96M95 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC42Q96M95 RN7SKP24-201ENST00000515888 284 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 RN7SKP132-201ENST00000516001 208 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 AP003467.2-201ENST00000520175 319 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC42Q96M95 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC42Q96M95 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC42Q96M95 EIF5A2P1-201ENST00000564027 460 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 AC009163.5-201ENST00000575421 637 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC42Q96M95 AL451007.1-201ENST00000595491 289 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 AC008687.2-201ENST00000597865 520 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 AC011374.2-201ENST00000607135 526 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 AC024560.3-201ENST00000608482 349 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC42Q96M95 MIR6076-201ENST00000617521 113 ntBASIC2.62□□□□□ -1.99
CCDC42Q96M95 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CCDC42Q96M95 AC092608.2-201ENST00000624427 218 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms