Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC090616.2-202ENST00000584248 222 ntBASIC4.86□□□□□ -1.63
CCDC136Q96JN2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC136Q96JN2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC136Q96JN2 AC022146.1-201ENST00000595307 847 ntBASIC4.86□□□□□ -1.63
CCDC136Q96JN2 BNIP3P23-201ENST00000599655 511 ntBASIC4.86□□□□□ -1.63
CCDC136Q96JN2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC136Q96JN2 AC097468.3-201ENST00000607956 456 ntBASIC4.86□□□□□ -1.63
CCDC136Q96JN2 AC004223.4-201ENST00000612426 332 ntBASIC4.86□□□□□ -1.63
CCDC136Q96JN2 PLCE1P1-201ENST00000622094 305 ntBASIC4.86□□□□□ -1.63
CCDC136Q96JN2 MIR3653-201ENST00000625572 110 ntBASIC4.86□□□□□ -1.63
CCDC136Q96JN2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC136Q96JN2 AC097655.1-201ENST00000635075 318 ntBASIC4.86□□□□□ -1.63
CCDC136Q96JN2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC136Q96JN2 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCDC136Q96JN2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC136Q96JN2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC136Q96JN2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC136Q96JN2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC010733.2-201ENST00000589496 5702 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC068538.1-201ENST00000376856 336 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 MIR184-201ENST00000384962 84 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AL356421.1-201ENST00000403255 413 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 RNU4-72P-201ENST00000410754 173 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC108032.1-201ENST00000416706 207 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AL137014.1-201ENST00000420490 1226 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC099677.1-201ENST00000420575 175 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 RSU1P2-202ENST00000437884 485 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 OR6K5P-201ENST00000447050 945 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AP000542.1-201ENST00000448473 371 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 NUTF2P3-201ENST00000448540 384 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 TPT1P12-201ENST00000448968 492 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 UQCRHP4-201ENST00000471686 272 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC104563.1-201ENST00000476147 376 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 RAC1P2-201ENST00000511164 579 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC108064.1-201ENST00000513791 460 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 RN7SKP122-201ENST00000515923 296 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 RNU6-232P-201ENST00000517144 64 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 RN7SKP289-201ENST00000517244 295 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC008489.1-201ENST00000524271 483 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 MIR4738-201ENST00000579134 87 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC092354.2-201ENST00000607786 514 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 RMST_8.1-201ENST00000610287 165 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AL445567.2-201ENST00000618935 498 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 MIR8059-201ENST00000620427 81 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 AC073530.2-201ENST00000623987 261 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 OR52H1-202ENST00000641796 1061 ntBASIC4.85□□□□□ -1.63
CCDC136Q96JN2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC136Q96JN2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 AL672167.1-206ENST00000356293 943 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 RNU6-283P-201ENST00000364788 107 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 MIR135A2-201ENST00000384854 100 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 MIR199A2-201ENST00000385289 110 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 AL445669.1-201ENST00000426743 755 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 VDAC1P3-201ENST00000434069 851 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 AC091862.1-201ENST00000438016 1100 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 RPL21P11-201ENST00000461458 483 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 BZW1P2-201ENST00000473537 826 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC136Q96JN2 AC018630.1-201ENST00000541376 925 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 MRPS36P5-201ENST00000551909 298 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 MIR4474-201ENST00000579189 78 ntBASIC4.84□□□□□ -1.63
CCDC136Q96JN2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms