Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU5E-1-201ENST00000362477 120 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 Y_RNA.256-201ENST00000364594 104 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 RNU6-867P-201ENST00000364956 107 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 RAB28P1-201ENST00000411517 641 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC127526.1-201ENST00000417526 366 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 MTCYBP24-201ENST00000420387 1106 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 ELOCP14-201ENST00000428070 331 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 RPS29P17-201ENST00000430795 166 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 ELOCP18-201ENST00000434209 337 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 ELOCP7-201ENST00000439968 331 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC093156.1-201ENST00000440382 670 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 MTND2P24-201ENST00000453434 806 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC133473.1-201ENST00000455173 299 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 snoU109.4-201ENST00000458953 143 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 PGBD4P4-201ENST00000509673 613 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC105914.1-201ENST00000511798 226 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC107934.1-201ENST00000522215 217 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 PHBP17-201ENST00000528576 541 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AP003385.6-201ENST00000531603 374 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AL512310.1-201ENST00000548639 172 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AL352979.3-201ENST00000553515 247 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AL157687.1-201ENST00000554853 619 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC008277.2-201ENST00000605196 797 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AP003117.2-201ENST00000606010 545 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC017083.3-201ENST00000609955 700 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC105429.2-201ENST00000610567 517 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC083809.1-201ENST00000615051 472 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC022306.2-201ENST00000617563 647 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC002550.2-201ENST00000621246 394 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC012150.2-201ENST00000621300 544 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AP006248.2-201ENST00000623309 592 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC040168.1-201ENST00000623594 991 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 AC006971.1-201ENST00000407916 4486 ntBASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTHRC1Q96CG8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AC018529.3-201ENST00000624212 2254 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 RNA5SP175-201ENST00000364275 119 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 SNORA62-201ENST00000365493 153 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 RNU6-278P-201ENST00000390945 109 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 RNU6-821P-201ENST00000390995 107 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 LAP3P1-201ENST00000403648 294 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 RPS15AP12-201ENST00000419498 388 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 CHIAP3-201ENST00000423668 1133 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AC011998.1-201ENST00000433403 117 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 PHBP16-201ENST00000446318 950 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 VN1R34P-201ENST00000447387 883 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 RPL23AP20-201ENST00000447965 421 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 FGF7P3-201ENST00000454645 303 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 RPL23AP24-201ENST00000458203 385 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 RPL38P1-201ENST00000460914 211 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AL139099.1-201ENST00000497398 403 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 FAM92A1P2-202ENST00000504766 877 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 ARL4AP2-201ENST00000507378 601 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 IGLVIV-65-201ENST00000517313 360 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AL109766.1-201ENST00000555080 552 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AL512360.1-201ENST00000555346 234 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 SUB1P2-201ENST00000556401 297 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 OR6R2P-201ENST00000609216 300 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AC002553.4-201ENST00000616896 331 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 U73479.1-201ENST00000618062 168 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AL159972.1-201ENST00000625150 448 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms