Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RN7SKP209-201ENST00000516888 304 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC105185.1-201ENST00000518705 535 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC022695.1-201ENST00000522089 237 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC007991.1-201ENST00000522680 631 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 MTCO2P15-201ENST00000532655 656 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC087499.8-201ENST00000578406 226 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 MIR5187-201ENST00000583479 76 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC061975.8-201ENST00000587058 721 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC004223.2-201ENST00000590309 544 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC090186.1-201ENST00000605991 572 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AL392048.1-201ENST00000613946 534 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AP000484.1-201ENST00000620067 1252 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 AC006111.3-201ENST00000622137 383 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 OR6C71P-202ENST00000641886 1107 ntBASIC3.34□□□□□ -1.87
NHLRC1Q6VVB1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
NHLRC1Q6VVB1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NHLRC1Q6VVB1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.34□□□□□ -1.88
NHLRC1Q6VVB1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.34□□□□□ -1.88
NHLRC1Q6VVB1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.34□□□□□ -1.88
NHLRC1Q6VVB1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
NHLRC1Q6VVB1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NHLRC1Q6VVB1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NHLRC1Q6VVB1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 SNORA4.1-201ENST00000364263 144 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 RNA5SP424-201ENST00000390988 115 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 RNU6-1242P-201ENST00000391052 103 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 RPL7P60-201ENST00000397636 735 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC025750.1-201ENST00000399891 379 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 YPEL5P1-201ENST00000419731 367 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AL159169.1-201ENST00000421119 127 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 MTCO2P17-201ENST00000424336 677 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AL591419.1-201ENST00000427423 339 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC024082.2-201ENST00000434771 238 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 RABEPKP1-201ENST00000440529 1026 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 RPS29P31-201ENST00000446147 164 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AL133162.1-201ENST00000463228 453 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC020699.1-201ENST00000505161 445 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 RNU6-528P-201ENST00000516926 100 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 RNU6-714P-201ENST00000516963 103 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 HIGD1AP10-201ENST00000527837 282 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 HSPE1P5-201ENST00000561489 272 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 MIR4286-201ENST00000580651 93 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 COX6CP3-201ENST00000580869 223 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 MIR92B-201ENST00000607575 96 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC068831.7-201ENST00000616954 363 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC079597.1-201ENST00000624306 508 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC009039.2-201ENST00000624524 529 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC008993.2-201ENST00000631744 806 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 AC092447.10-201ENST00000620607 1652 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 ZNF807-201ENST00000328088 1707 ntBASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.33□□□□□ -1.88
NHLRC1Q6VVB1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 RNU6-1078P-201ENST00000364522 103 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 AL359837.1-201ENST00000381357 287 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 SNORA1.3-201ENST00000384676 136 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 U8.11-201ENST00000384699 133 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 U8.12-201ENST00000384701 133 ntBASIC3.32□□□□□ -1.88
NHLRC1Q6VVB1 MIR135A2-201ENST00000384854 100 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms