Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 NXPH1-205ENST00000602349 1953 ntBASIC4.27□□□□□ -1.73
RNF220Q5VTB9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF220Q5VTB9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 SDAD1P1-202ENST00000524156 2051 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 OR1S2-201ENST00000302592 978 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 RNA5SP388-201ENST00000362584 119 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 RNY1P12-201ENST00000364251 105 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 RNA5SP189-201ENST00000364920 115 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 MIR607-201ENST00000385241 96 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AL645927.1-201ENST00000396783 406 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 RPL7P60-201ENST00000397636 735 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 Y_RNA.619-201ENST00000410951 90 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 MTND3P17-201ENST00000416968 344 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 CYP4F29P-201ENST00000420685 446 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 DNAJC19P4-201ENST00000440115 345 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 MTND1P1-201ENST00000445453 368 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 RPS11P1-201ENST00000451072 473 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 MTCO3P20-201ENST00000454926 688 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AL359385.1-201ENST00000456509 365 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC063943.1-201ENST00000465434 453 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 RPL31P13-201ENST00000484151 370 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC004453.1-201ENST00000487895 408 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 VN1R104P-201ENST00000505115 1009 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 RNU6-1073P-201ENST00000517182 106 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 CCNG2P1-201ENST00000549521 1000 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 RN7SL652P-201ENST00000577769 300 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 MIR4646-201ENST00000580775 63 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 VN1R79P-201ENST00000593540 513 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC010201.1-201ENST00000605051 540 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AL021997.1-201ENST00000605757 193 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC004492.1-201ENST00000607036 742 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AP002360.3-201ENST00000607673 710 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 TUG1_2.1-201ENST00000614234 87 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC006338.2-201ENST00000616864 791 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC006338.1-201ENST00000618453 749 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AL360181.4-201ENST00000621752 134 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC068880.5-201ENST00000624331 290 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AC112200.1-201ENST00000625015 234 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 OR5AK4P-201ENST00000635912 903 ntBASIC4.26□□□□□ -1.73
RNF220Q5VTB9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF220Q5VTB9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 RNA5SP191-201ENST00000362585 102 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 RN7SKP226-201ENST00000364912 300 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 Y_RNA.296-201ENST00000364930 108 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 RNU6-648P-201ENST00000410190 107 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 RN7SKP159-201ENST00000410657 292 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 UBE2FP1-201ENST00000416536 447 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 ELOCP4-201ENST00000420090 333 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 PPP1R11P2-201ENST00000423543 382 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 RPS3AP44-201ENST00000425466 790 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 RPL31P35-201ENST00000431058 377 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AC005154.2-201ENST00000438110 379 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF220Q5VTB9 ISCUP1-201ENST00000454451 448 ntBASIC4.25□□□□□ -1.73
RNF220Q5VTB9 RPL36AP13-201ENST00000457490 317 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms