Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 SNORD14.1-201ENST00000365609 90 ntBASIC6.56□□□□□ -1.36
RC3H1Q5TC82 RNU1-74P-201ENST00000384108 171 ntBASIC6.56□□□□□ -1.36
RC3H1Q5TC82 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 AC068287.1-201ENST00000430283 295 ntBASIC6.56□□□□□ -1.36
RC3H1Q5TC82 RBMY2TP-201ENST00000451162 947 ntBASIC6.56□□□□□ -1.36
RC3H1Q5TC82 RPL21P93-201ENST00000480465 489 ntBASIC6.56□□□□□ -1.36
RC3H1Q5TC82 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 MIR5096-201ENST00000583713 70 ntBASIC6.56□□□□□ -1.36
RC3H1Q5TC82 MIR4420-201ENST00000583944 77 ntBASIC6.56□□□□□ -1.36
RC3H1Q5TC82 AC009779.6-201ENST00000603972 165 ntBASIC6.56□□□□□ -1.36
RC3H1Q5TC82 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 DUSP12P1-201ENST00000612874 516 ntBASIC6.56□□□□□ -1.36
RC3H1Q5TC82 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AC245100.2-201ENST00000454544 1679 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AL121950.1-201ENST00000624993 2077 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 Y_RNA.214-201ENST00000364201 112 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 SNORA66-201ENST00000384792 133 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AL359643.1-201ENST00000404109 423 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AL078604.1-201ENST00000404609 466 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 GSTM3P2-201ENST00000412746 530 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 RBMY1KP-201ENST00000423480 476 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 USMG5P1-201ENST00000425964 177 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AC099799.1-201ENST00000439809 192 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AL031584.1-201ENST00000447169 754 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AC013470.1-201ENST00000453438 462 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AC133473.1-201ENST00000455173 299 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AC090686.1-201ENST00000481577 749 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 MRPS33P2-201ENST00000507850 322 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AC021146.3-201ENST00000511911 260 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 SCARNA16.2-201ENST00000516520 172 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AP005432.2-201ENST00000608162 586 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 SDR42E1P2-201ENST00000614861 481 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 SDR42E1P4-201ENST00000620894 481 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.55□□□□□ -1.36
RC3H1Q5TC82 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RC3H1Q5TC82 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 RNU6-28P-201ENST00000362378 107 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 SNORD50B-201ENST00000364995 70 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 Y_RNA.464-201ENST00000384282 110 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 Y_RNA.518-201ENST00000384552 113 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 DSTNP4-201ENST00000399472 474 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 RN7SL354P-201ENST00000469282 294 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AP000893.1-201ENST00000474462 794 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 RN7SL319P-201ENST00000480656 221 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 GLUD1P3-202ENST00000508551 200 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AC060771.1-201ENST00000582031 164 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 HMGB2P1-201ENST00000591146 634 ntBASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC6.54□□□□□ -1.36
RC3H1Q5TC82 AL139124.1-201ENST00000609123 421 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms