Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RNU1-108P-201ENST00000362556 161 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 Y_RNA.453-201ENST00000384223 109 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 RPL36AP36-201ENST00000418616 301 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 RPS27AP12-201ENST00000429552 465 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 FAM103A2P-201ENST00000444122 354 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 USP9YP34-201ENST00000453983 808 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC087312.1-201ENST00000471411 480 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC104563.1-201ENST00000476147 376 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 FAM92A1P2-202ENST00000504766 877 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 PPBPP1-201ENST00000510807 373 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 RNU6-714P-201ENST00000516963 103 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 MIR2116-201ENST00000517221 80 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 MYL12AP1-201ENST00000518490 515 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 TOMM20P2-201ENST00000540082 421 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AP005205.1-201ENST00000563503 508 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AP000907.4-201ENST00000604143 237 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC015813.4-201ENST00000610469 179 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC136475.10-201ENST00000620253 385 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AL445264.1-201ENST00000621719 171 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC112484.5-201ENST00000624189 228 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AL118496.1-201ENST00000440201 1812 ntBASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CCDC178Q5BJE1 AC011266.1-201ENST00000624119 3569 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC130650.2-201ENST00000618736 2403 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC010329.2-201ENST00000595195 2737 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 RNU6-28P-201ENST00000362378 107 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 Y_RNA.88-201ENST00000363029 99 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 RNU6-1243P-201ENST00000364028 107 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 RN7SKP227-201ENST00000364445 330 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 Y_RNA.450-201ENST00000384198 113 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 RNU6-780P-201ENST00000391030 104 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 RPL31P1-201ENST00000398116 372 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 CALM2P3-201ENST00000400429 449 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 CCDC58P2-201ENST00000417131 366 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AL589872.1-201ENST00000426602 288 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 RPL31P35-201ENST00000431058 377 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AL353597.2-202ENST00000434901 373 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC009961.2-201ENST00000435771 251 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 PTGES3P3-201ENST00000511479 482 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC104057.1-201ENST00000515547 497 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC018552.3-201ENST00000567416 561 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 CYP4A43P-201ENST00000568156 121 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 MTND6P33-201ENST00000571794 183 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AL390208.1-201ENST00000605885 644 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AL161734.1-201ENST00000609720 557 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC019226.1-201ENST00000625666 515 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 MIR3688-2-201ENST00000636963 87 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC010149.2-201ENST00000637608 315 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AL049780.3-201ENST00000624612 1583 ntBASIC4.86□□□□□ -1.63
CCDC178Q5BJE1 AC009229.4-201ENST00000623854 1947 ntBASIC4.85□□□□□ -1.63
CCDC178Q5BJE1 AC092125.1-201ENST00000562568 1995 ntBASIC4.85□□□□□ -1.63
CCDC178Q5BJE1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC178Q5BJE1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms