Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH1Q08174 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH1Q08174 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH1Q08174 Y_RNA.80-201ENST00000362996 102 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH1Q08174 Y_RNA.399-201ENST00000383955 105 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 RNU6-128P-201ENST00000383976 107 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 Y_RNA.476-201ENST00000384347 108 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 SNORD56.6-201ENST00000384569 71 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 SNORA75.6-201ENST00000391318 127 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH1Q08174 RNU2-47P-201ENST00000410649 186 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 RNU6-847P-201ENST00000411115 108 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 RPLP0P7-201ENST00000416050 667 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 UBE2FP1-201ENST00000416536 447 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH1Q08174 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH1Q08174 RPL7AP49-201ENST00000429522 581 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AL591438.1-201ENST00000433508 581 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AC064862.4-201ENST00000442180 334 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH1Q08174 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH1Q08174 U8.20-201ENST00000459445 131 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.27□□□□□ -1.57
PCDH1Q08174 AC006499.3-201ENST00000506077 748 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH1Q08174 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PCDH1Q08174 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH1Q08174 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDH1Q08174 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDH1Q08174 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDH1Q08174 AL049872.1-201ENST00000556323 322 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH1Q08174 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH1Q08174 AL669831.4-202ENST00000590817 238 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AC011445.2-201ENST00000599274 173 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDH1Q08174 NUTF2P8-201ENST00000604593 363 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AL670379.4-201ENST00000605279 254 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AC006329.2-201ENST00000611491 394 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 SNHG22-203ENST00000617833 660 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 AL589994.2-201ENST00000621124 579 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.27□□□□□ -1.57
PCDH1Q08174 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.27□□□□□ -1.57
PCDH1Q08174 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH1Q08174 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PCDH1Q08174 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH1Q08174 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH1Q08174 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.27□□□□□ -1.57
PCDH1Q08174 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH1Q08174 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PCDH1Q08174 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH1Q08174 AC007529.1-201ENST00000418574 2178 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH1Q08174 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH1Q08174 AL360270.2-201ENST00000562952 5985 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH1Q08174 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH1Q08174 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PCDH1Q08174 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PCDH1Q08174 MIR323A-201ENST00000362199 86 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 SMIM11P1-201ENST00000369586 178 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 SET-203ENST00000372688 801 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH1Q08174 RNU6-339P-201ENST00000384310 107 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 SNORA16.2-201ENST00000390991 127 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 SNORA17A-201ENST00000391185 133 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 RNU6-1050P-201ENST00000410388 107 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH1Q08174 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH1Q08174 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH1Q08174 AL161636.2-201ENST00000445179 927 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 RPL36AP39-201ENST00000445859 318 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH1Q08174 RPL5P30-201ENST00000465511 891 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 AC104472.2-201ENST00000469035 601 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 AC010350.1-201ENST00000504908 231 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDH1Q08174 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH1Q08174 AC026782.1-201ENST00000512952 449 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 AC098976.1-201ENST00000513014 541 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH1Q08174 SNORA14.1-201ENST00000516113 141 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 RNU6-1069P-201ENST00000516612 133 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 RNU1-54P-201ENST00000517181 120 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH1Q08174 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDH1Q08174 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDH1Q08174 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDH1Q08174 MYL12BP1-201ENST00000569826 507 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 RN7SL356P-201ENST00000582228 248 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 PRR13P7-201ENST00000605538 430 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 SNORA17.5-201ENST00000630429 132 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PCDH1Q08174 AL732372.2-225ENST00000642124 456 ntBASIC5.26□□□□□ -1.57
PCDH1Q08174 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
PCDH1Q08174 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PCDH1Q08174 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH1Q08174 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDH1Q08174 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms