Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC079780.1-201ENST00000428259 207 ntBASIC2.87□□□□□ -1.95
TPM4P67936 AC087499.2-201ENST00000432861 149 ntBASIC2.87□□□□□ -1.95
TPM4P67936 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.87□□□□□ -1.95
TPM4P67936 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.87□□□□□ -1.95
TPM4P67936 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.87□□□□□ -1.95
TPM4P67936 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.87□□□□□ -1.95
TPM4P67936 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TPM4P67936 MTCO1P31-201ENST00000506355 492 ntBASIC2.87□□□□□ -1.95
TPM4P67936 RAC1P5-201ENST00000512182 576 ntBASIC2.87□□□□□ -1.95
TPM4P67936 AC010374.2-201ENST00000512933 535 ntBASIC2.87□□□□□ -1.95
TPM4P67936 AC092593.2-201ENST00000513866 913 ntBASIC2.87□□□□□ -1.95
TPM4P67936 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.87□□□□□ -1.95
TPM4P67936 CKS1BP7-201ENST00000522230 235 ntBASIC2.87□□□□□ -1.95
TPM4P67936 OR10V3P-201ENST00000525712 725 ntBASIC2.87□□□□□ -1.95
TPM4P67936 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.87□□□□□ -1.95
TPM4P67936 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.87□□□□□ -1.95
TPM4P67936 AC128657.1-201ENST00000549459 145 ntBASIC2.87□□□□□ -1.95
TPM4P67936 AP005205.1-201ENST00000563503 508 ntBASIC2.87□□□□□ -1.95
TPM4P67936 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.87□□□□□ -1.95
TPM4P67936 AC053481.3-201ENST00000577881 843 ntBASIC2.87□□□□□ -1.95
TPM4P67936 MIR4446-201ENST00000578505 67 ntBASIC2.87□□□□□ -1.95
TPM4P67936 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.87□□□□□ -1.95
TPM4P67936 AC010620.2-201ENST00000600135 313 ntBASIC2.87□□□□□ -1.95
TPM4P67936 AC119501.1-201ENST00000603646 475 ntBASIC2.87□□□□□ -1.95
TPM4P67936 YPEL5P2-201ENST00000605553 359 ntBASIC2.87□□□□□ -1.95
TPM4P67936 STMN1P1-201ENST00000617809 440 ntBASIC2.87□□□□□ -1.95
TPM4P67936 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TPM4P67936 AC017104.5-201ENST00000637647 639 ntBASIC2.87□□□□□ -1.95
TPM4P67936 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.87□□□□□ -1.95
TPM4P67936 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TPM4P67936 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.86□□□□□ -1.95
TPM4P67936 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.86□□□□□ -1.95
TPM4P67936 RNU6-821P-201ENST00000390995 107 ntBASIC2.86□□□□□ -1.95
TPM4P67936 AL356057.2-201ENST00000403318 432 ntBASIC2.86□□□□□ -1.95
TPM4P67936 DHFRP5-201ENST00000406944 564 ntBASIC2.86□□□□□ -1.95
TPM4P67936 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.86□□□□□ -1.95
TPM4P67936 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.86□□□□□ -1.95
TPM4P67936 AC010881.1-201ENST00000433830 235 ntBASIC2.86□□□□□ -1.95
TPM4P67936 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.86□□□□□ -1.95
TPM4P67936 FAM133DP-201ENST00000464802 691 ntBASIC2.86□□□□□ -1.95
TPM4P67936 RPS29P26-201ENST00000477483 171 ntBASIC2.86□□□□□ -1.95
TPM4P67936 RPS4XP6-201ENST00000477670 797 ntBASIC2.86□□□□□ -1.95
TPM4P67936 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.86□□□□□ -1.95
TPM4P67936 PRELID3BP4-201ENST00000515476 571 ntBASIC2.86□□□□□ -1.95
TPM4P67936 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.86□□□□□ -1.95
TPM4P67936 AP001804.3-201ENST00000525146 880 ntBASIC2.86□□□□□ -1.95
TPM4P67936 NOP56P3-201ENST00000549457 385 ntBASIC2.86□□□□□ -1.95
TPM4P67936 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.86□□□□□ -1.95
TPM4P67936 U73023.1-201ENST00000603134 700 ntBASIC2.86□□□□□ -1.95
TPM4P67936 AC106900.2-201ENST00000604994 317 ntBASIC2.86□□□□□ -1.95
TPM4P67936 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.86□□□□□ -1.95
TPM4P67936 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TPM4P67936 MTND5P1-201ENST00000445440 1375 ntBASIC2.86□□□□□ -1.95
TPM4P67936 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TPM4P67936 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TPM4P67936 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TPM4P67936 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TPM4P67936 RNA5SP393-201ENST00000363423 117 ntBASIC2.85□□□□□ -1.95
TPM4P67936 U8.8-201ENST00000365399 135 ntBASIC2.85□□□□□ -1.95
TPM4P67936 RNU6-1151P-201ENST00000384684 107 ntBASIC2.85□□□□□ -1.95
TPM4P67936 RNU6-712P-201ENST00000410558 100 ntBASIC2.85□□□□□ -1.95
TPM4P67936 AC092745.2-202ENST00000411880 369 ntBASIC2.85□□□□□ -1.95
TPM4P67936 AL024507.1-201ENST00000412741 274 ntBASIC2.85□□□□□ -1.95
TPM4P67936 AC080125.1-201ENST00000414888 684 ntBASIC2.85□□□□□ -1.95
TPM4P67936 RPLP0P7-201ENST00000416050 667 ntBASIC2.85□□□□□ -1.95
TPM4P67936 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.85□□□□□ -1.95
TPM4P67936 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.85□□□□□ -1.95
TPM4P67936 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.85□□□□□ -1.95
TPM4P67936 LSM1P1-201ENST00000438629 273 ntBASIC2.85□□□□□ -1.95
TPM4P67936 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.85□□□□□ -1.95
TPM4P67936 RAB11AP1-201ENST00000442978 646 ntBASIC2.85□□□□□ -1.95
TPM4P67936 AP001992.1-205ENST00000462248 379 ntBASIC2.85□□□□□ -1.95
TPM4P67936 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.85□□□□□ -1.95
TPM4P67936 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.85□□□□□ -1.95
TPM4P67936 AC008676.3-201ENST00000521237 435 ntBASIC2.85□□□□□ -1.95
TPM4P67936 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.85□□□□□ -1.95
TPM4P67936 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.85□□□□□ -1.95
TPM4P67936 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.85□□□□□ -1.95
TPM4P67936 ATP5A1P2-202ENST00000616464 443 ntBASIC2.85□□□□□ -1.95
TPM4P67936 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TPM4P67936 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TPM4P67936 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.85□□□□□ -1.95
TPM4P67936 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
TPM4P67936 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
TPM4P67936 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
TPM4P67936 RNU6-1180P-201ENST00000364935 107 ntBASIC2.84□□□□□ -1.95
TPM4P67936 SNORA9-201ENST00000384215 133 ntBASIC2.84□□□□□ -1.95
TPM4P67936 SNORA80E-201ENST00000384744 137 ntBASIC2.84□□□□□ -1.95
TPM4P67936 MIR34B-201ENST00000385076 84 ntBASIC2.84□□□□□ -1.95
TPM4P67936 ATP5F1P3-201ENST00000397213 657 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AL513477.1-202ENST00000417061 214 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AL137014.1-201ENST00000420490 1226 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.84□□□□□ -1.95
TPM4P67936 AL139132.1-201ENST00000431587 344 ntBASIC2.84□□□□□ -1.95
TPM4P67936 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.84□□□□□ -1.95
TPM4P67936 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.84□□□□□ -1.95
TPM4P67936 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.84□□□□□ -1.95
TPM4P67936 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.84□□□□□ -1.95
TPM4P67936 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.84□□□□□ -1.95
TPM4P67936 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms