Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPS4XP62701 SNORD9-201ENST00000362566 104 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 RNA5SP50-201ENST00000363731 107 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.17□□□□□ -1.9
RPS4XP62701 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.17□□□□□ -1.9
RPS4XP62701 RNU6-55P-201ENST00000411092 107 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 RNU6-954P-201ENST00000411355 107 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.17□□□□□ -1.9
RPS4XP62701 AC017079.2-201ENST00000416102 485 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.17□□□□□ -1.9
RPS4XP62701 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.17□□□□□ -1.9
RPS4XP62701 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.17□□□□□ -1.9
RPS4XP62701 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.17□□□□□ -1.9
RPS4XP62701 AP000907.1-201ENST00000428428 510 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AC073063.1-201ENST00000434352 607 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.17□□□□□ -1.9
RPS4XP62701 MUPP-201ENST00000438111 566 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 HMGB1P12-201ENST00000438594 598 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPS4XP62701 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.17□□□□□ -1.9
RPS4XP62701 AL357552.1-201ENST00000445254 415 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 Z73417.1-201ENST00000447373 778 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AL353691.1-201ENST00000451332 387 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.17□□□□□ -1.9
RPS4XP62701 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.17□□□□□ -1.9
RPS4XP62701 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.17□□□□□ -1.9
RPS4XP62701 Z82190.1-201ENST00000454534 490 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 RNU7-136P-201ENST00000458819 69 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 snoU13.4-201ENST00000458916 104 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AC004801.2-202ENST00000463559 283 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 RPL21P104-201ENST00000464143 478 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 RPS4XP13-201ENST00000483219 789 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AC108729.1-201ENST00000487812 947 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.17□□□□□ -1.9
RPS4XP62701 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.17□□□□□ -1.9
RPS4XP62701 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.17□□□□□ -1.9
RPS4XP62701 AC004062.1-201ENST00000509926 645 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.17□□□□□ -1.9
RPS4XP62701 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.17□□□□□ -1.9
RPS4XP62701 SNORA74D-201ENST00000516404 141 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 RN7SKP289-201ENST00000517244 295 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.17□□□□□ -1.9
RPS4XP62701 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.17□□□□□ -1.9
RPS4XP62701 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.17□□□□□ -1.9
RPS4XP62701 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.17□□□□□ -1.9
RPS4XP62701 CYCSP2-201ENST00000558168 301 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.17□□□□□ -1.9
RPS4XP62701 MIR3922-201ENST00000585192 84 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AC020914.6-201ENST00000594327 272 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AL592221.1-201ENST00000605266 382 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AC006270.3-201ENST00000605967 1036 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.17□□□□□ -1.9
RPS4XP62701 AL592295.2-201ENST00000612578 206 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.17□□□□□ -1.9
RPS4XP62701 AL357080.1-201ENST00000617394 239 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AL596245.1-201ENST00000618994 362 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AL360181.4-201ENST00000621752 134 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AP002782.1-201ENST00000623107 614 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AC110801.1-201ENST00000623590 212 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AC244258.1-201ENST00000637553 1071 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 AC119674.1-207ENST00000641355 633 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 MFSD8-236ENST00000641509 4050 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RPS4XP62701 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPS4XP62701 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.17□□□□□ -1.9
RPS4XP62701 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPS4XP62701 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPS4XP62701 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RPS4XP62701 DDX43P2-201ENST00000604753 1354 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPS4XP62701 AP002088.1-201ENST00000382740 395 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 RNU6-83P-201ENST00000384568 112 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 AL031679.1-201ENST00000400616 525 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 AL356131.1-201ENST00000405826 414 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 RN7SKP285-201ENST00000410137 318 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.16□□□□□ -1.9
RPS4XP62701 MTCYBP38-201ENST00000417160 1123 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 AL953862.1-201ENST00000423016 168 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.16□□□□□ -1.9
RPS4XP62701 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.16□□□□□ -1.9
RPS4XP62701 AL159987.2-201ENST00000432754 307 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.16□□□□□ -1.9
RPS4XP62701 AC092641.1-201ENST00000440229 772 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 FGF7P5-201ENST00000441829 291 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 HMGB1P15-201ENST00000453854 435 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 USP9YP10-201ENST00000454868 628 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 NECAP1P2-201ENST00000455668 727 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.16□□□□□ -1.9
RPS4XP62701 HMGN2P16-201ENST00000456802 261 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 RPS4XP10-201ENST00000465034 731 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 SNRPGP3-201ENST00000469405 227 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPS4XP62701 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.16□□□□□ -1.9
RPS4XP62701 AL358832.1-201ENST00000497800 389 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 DSTNP2-201ENST00000504533 515 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 USP9YP5-201ENST00000511770 630 ntBASIC3.16□□□□□ -1.9
RPS4XP62701 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.16□□□□□ -1.9
RPS4XP62701 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.16□□□□□ -1.9
RPS4XP62701 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms