Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 MTND4P8-201ENST00000514997 1362 ntBASIC1.98□□□□□ -2.09
LSM3P62310 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LSM3P62310 AC008432.1-201ENST00000615912 1320 ntBASIC1.98□□□□□ -2.09
LSM3P62310 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LSM3P62310 RNU6-859P-201ENST00000362728 107 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AL359511.1-201ENST00000402970 211 ntBASIC1.98□□□□□ -2.09
LSM3P62310 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM3P62310 AC010385.1-201ENST00000412374 256 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.98□□□□□ -2.09
LSM3P62310 AC092447.6-201ENST00000414578 210 ntBASIC1.98□□□□□ -2.09
LSM3P62310 MTCO1P39-201ENST00000426148 480 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.98□□□□□ -2.09
LSM3P62310 RPL36P19-201ENST00000430744 301 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AL392003.1-201ENST00000434394 243 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AL645638.1-201ENST00000440519 361 ntBASIC1.98□□□□□ -2.09
LSM3P62310 BX510359.1-201ENST00000456973 237 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC090515.1-201ENST00000465295 476 ntBASIC1.98□□□□□ -2.09
LSM3P62310 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.98□□□□□ -2.09
LSM3P62310 CDC42P4-201ENST00000510507 563 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC074250.1-201ENST00000511117 192 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC034159.1-201ENST00000513885 583 ntBASIC1.98□□□□□ -2.09
LSM3P62310 RNU1-104P-201ENST00000517280 175 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC021269.2-201ENST00000532318 330 ntBASIC1.98□□□□□ -2.09
LSM3P62310 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.98□□□□□ -2.09
LSM3P62310 CCNG2P1-201ENST00000549521 1000 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM3P62310 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.98□□□□□ -2.09
LSM3P62310 MIR4700-201ENST00000578311 74 ntBASIC1.98□□□□□ -2.09
LSM3P62310 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM3P62310 MIR5002-201ENST00000584713 97 ntBASIC1.98□□□□□ -2.09
LSM3P62310 GLUD1P4-201ENST00000590914 418 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC002984.1-201ENST00000591692 448 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC008739.2-201ENST00000597006 317 ntBASIC1.98□□□□□ -2.09
LSM3P62310 U73023.1-201ENST00000603134 700 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC007619.2-201ENST00000605743 379 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC112503.2-201ENST00000609005 552 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC107294.1-201ENST00000609524 467 ntBASIC1.98□□□□□ -2.09
LSM3P62310 AC140725.3-201ENST00000616193 880 ntBASIC1.98□□□□□ -2.09
LSM3P62310 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.98□□□□□ -2.09
LSM3P62310 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.98□□□□□ -2.09
LSM3P62310 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
LSM3P62310 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.97□□□□□ -2.09
LSM3P62310 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LSM3P62310 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LSM3P62310 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.97□□□□□ -2.09
LSM3P62310 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
LSM3P62310 AC138915.1-201ENST00000565427 1685 ntBASIC1.97□□□□□ -2.09
LSM3P62310 ZNF833P-201ENST00000424938 1494 ntBASIC1.97□□□□□ -2.09
LSM3P62310 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LSM3P62310 MIR518C-201ENST00000384822 101 ntBASIC1.97□□□□□ -2.09
LSM3P62310 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.97□□□□□ -2.09
LSM3P62310 MIR1250-201ENST00000408098 113 ntBASIC1.97□□□□□ -2.09
LSM3P62310 RNU2-52P-201ENST00000410680 190 ntBASIC1.97□□□□□ -2.09
LSM3P62310 AL024507.1-201ENST00000412741 274 ntBASIC1.97□□□□□ -2.09
LSM3P62310 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.97□□□□□ -2.09
LSM3P62310 AL137014.1-201ENST00000420490 1226 ntBASIC1.97□□□□□ -2.09
LSM3P62310 AL160175.1-201ENST00000428124 247 ntBASIC1.97□□□□□ -2.09
LSM3P62310 ARL5AP4-201ENST00000430731 512 ntBASIC1.97□□□□□ -2.09
LSM3P62310 OR6C71P-201ENST00000432580 913 ntBASIC1.97□□□□□ -2.09
LSM3P62310 AL591719.1-201ENST00000444669 744 ntBASIC1.97□□□□□ -2.09
LSM3P62310 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.97□□□□□ -2.09
LSM3P62310 AC025033.1-201ENST00000463883 194 ntBASIC1.97□□□□□ -2.09
LSM3P62310 RPL23AP70-201ENST00000483361 460 ntBASIC1.97□□□□□ -2.09
LSM3P62310 AC090096.1-201ENST00000489168 390 ntBASIC1.97□□□□□ -2.09
LSM3P62310 RPL23AP49-201ENST00000492925 468 ntBASIC1.97□□□□□ -2.09
LSM3P62310 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.97□□□□□ -2.09
LSM3P62310 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM3P62310 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM3P62310 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.97□□□□□ -2.09
LSM3P62310 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.97□□□□□ -2.09
LSM3P62310 AC012182.1-201ENST00000570133 895 ntBASIC1.97□□□□□ -2.09
LSM3P62310 MIR4504-201ENST00000577413 92 ntBASIC1.97□□□□□ -2.09
LSM3P62310 AC103881.1-201ENST00000603476 538 ntBASIC1.97□□□□□ -2.09
LSM3P62310 AL137843.1-201ENST00000605078 385 ntBASIC1.97□□□□□ -2.09
LSM3P62310 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.97□□□□□ -2.09
LSM3P62310 OR8B1P-202ENST00000641132 1178 ntBASIC1.97□□□□□ -2.09
LSM3P62310 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
LSM3P62310 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LSM3P62310 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM3P62310 AC104446.1-201ENST00000613728 1321 ntBASIC1.96□□□□□ -2.1
LSM3P62310 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM3P62310 AC016716.1-201ENST00000265882 708 ntBASIC1.96□□□□□ -2.1
LSM3P62310 HSPE1P11-201ENST00000339579 310 ntBASIC1.96□□□□□ -2.1
LSM3P62310 OR56A5-201ENST00000340110 738 ntBASIC1.96□□□□□ -2.1
LSM3P62310 SNORA67.1-201ENST00000364749 141 ntBASIC1.96□□□□□ -2.1
LSM3P62310 RNU1-140P-201ENST00000365040 165 ntBASIC1.96□□□□□ -2.1
LSM3P62310 ATP5F1P3-201ENST00000397213 657 ntBASIC1.96□□□□□ -2.1
LSM3P62310 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM3P62310 LSM1P1-201ENST00000438629 273 ntBASIC1.96□□□□□ -2.1
LSM3P62310 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.96□□□□□ -2.1
LSM3P62310 AL627224.1-201ENST00000448334 444 ntBASIC1.96□□□□□ -2.1
LSM3P62310 SNORD109B-201ENST00000458961 67 ntBASIC1.96□□□□□ -2.1
LSM3P62310 SNORD109A-201ENST00000459128 67 ntBASIC1.96□□□□□ -2.1
LSM3P62310 RPL30P14-201ENST00000482744 348 ntBASIC1.96□□□□□ -2.1
LSM3P62310 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LSM3P62310 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.96□□□□□ -2.1
LSM3P62310 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LSM3P62310 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM3P62310 HMGB3P3-201ENST00000510526 400 ntBASIC1.96□□□□□ -2.1
LSM3P62310 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms