Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPS3AP61247 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPS3AP61247 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.8□□□□□ -1.8
RPS3AP61247 AL731566.2-201ENST00000618971 317 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 AC091965.5-201ENST00000624785 342 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.8□□□□□ -1.8
RPS3AP61247 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.8□□□□□ -1.8
RPS3AP61247 AC009902.3-201ENST00000606235 2172 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPS3AP61247 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPS3AP61247 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPS3AP61247 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.8□□□□□ -1.8
RPS3AP61247 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPS3AP61247 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPS3AP61247 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPS3AP61247 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPS3AP61247 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.79□□□□□ -1.8
RPS3AP61247 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RPS3AP61247 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RPS3AP61247 SNORA37-201ENST00000384504 129 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 RNU6-114P-201ENST00000384704 105 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.79□□□□□ -1.8
RPS3AP61247 THAP5P1-201ENST00000439089 262 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 RPL7P36-201ENST00000444633 681 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.79□□□□□ -1.8
RPS3AP61247 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.79□□□□□ -1.8
RPS3AP61247 HMGN2P16-201ENST00000456802 261 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 AP1S2P1-201ENST00000457344 379 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 RPL31P61-201ENST00000496160 376 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.79□□□□□ -1.8
RPS3AP61247 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.79□□□□□ -1.8
RPS3AP61247 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.79□□□□□ -1.8
RPS3AP61247 AC109446.2-201ENST00000567872 497 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.79□□□□□ -1.8
RPS3AP61247 AC008088.1-201ENST00000580993 280 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 MIR4307-201ENST00000582802 84 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.79□□□□□ -1.8
RPS3AP61247 AL109653.1-201ENST00000603091 248 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 AL161729.3-201ENST00000603533 673 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 PRELID3BP8-201ENST00000604148 295 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.79□□□□□ -1.8
RPS3AP61247 AC008443.7-201ENST00000622195 246 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 AL445363.3-201ENST00000623080 671 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.79□□□□□ -1.8
RPS3AP61247 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RPS3AP61247 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RPS3AP61247 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
RPS3AP61247 AL672296.1-201ENST00000427780 2158 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 AC011460.1-201ENST00000636268 1834 ntBASIC3.79□□□□□ -1.8
RPS3AP61247 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.79□□□□□ -1.8
RPS3AP61247 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.78□□□□□ -1.8
RPS3AP61247 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPS3AP61247 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.78□□□□□ -1.8
RPS3AP61247 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPS3AP61247 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS3AP61247 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPS3AP61247 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPS3AP61247 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RPS3AP61247 AL583835.1-201ENST00000399570 407 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AL022722.2-201ENST00000402519 180 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AL359704.1-201ENST00000411586 781 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 TPMTP3-201ENST00000411928 735 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 MTND1P21-201ENST00000412991 285 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.78□□□□□ -1.8
RPS3AP61247 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.78□□□□□ -1.8
RPS3AP61247 OR8F1P-201ENST00000425243 930 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.78□□□□□ -1.8
RPS3AP61247 AL512286.1-201ENST00000439244 400 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS3AP61247 AC007967.1-201ENST00000455422 1159 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AC004801.2-202ENST00000463559 283 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 RPL7P19-201ENST00000469948 618 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 BET1P1-201ENST00000482276 359 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 RPS27AP13-201ENST00000498403 237 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.78□□□□□ -1.8
RPS3AP61247 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS3AP61247 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS3AP61247 NDUFB4P9-201ENST00000511646 388 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AC105914.1-201ENST00000511798 226 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS3AP61247 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS3AP61247 AC118465.1-201ENST00000513820 1271 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 MTCO1P35-201ENST00000515270 228 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AC026801.2-201ENST00000515352 425 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 IGKV2-38-201ENST00000517443 247 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS3AP61247 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS3AP61247 AC011260.1-201ENST00000578420 472 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPS3AP61247 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.78□□□□□ -1.8
RPS3AP61247 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.78□□□□□ -1.8
RPS3AP61247 WISP1-OT1-201ENST00000602893 642 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AP000403.1-201ENST00000603349 851 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.78□□□□□ -1.8
RPS3AP61247 AL392048.1-201ENST00000613946 534 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AC009268.2-201ENST00000621925 457 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 MIR7702-201ENST00000621931 59 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 AC244258.1-201ENST00000637553 1071 ntBASIC3.78□□□□□ -1.8
RPS3AP61247 OR52H1-202ENST00000641796 1061 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms