Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RN7SKP157-201ENST00000516174 282 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 SNORA31.26-201ENST00000517250 137 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.99□□□□□ -1.93
PKNOX1P55347 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.99□□□□□ -1.93
PKNOX1P55347 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.99□□□□□ -1.93
PKNOX1P55347 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AC012119.1-201ENST00000603184 222 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AC100793.4-201ENST00000613683 429 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AC231759.1-201ENST00000616455 597 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.99□□□□□ -1.93
PKNOX1P55347 AC104985.3-201ENST00000623479 597 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AC010872.1-201ENST00000624225 675 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AC034229.5-201ENST00000624258 185 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 MKKS-204ENST00000639674 192 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AP005901.5-201ENST00000545779 1796 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 AL049780.3-201ENST00000624612 1583 ntBASIC2.99□□□□□ -1.93
PKNOX1P55347 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.99□□□□□ -1.93
PKNOX1P55347 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.99□□□□□ -1.93
PKNOX1P55347 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.98□□□□□ -1.93
PKNOX1P55347 GDI2P1-201ENST00000429312 1336 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AL645568.2-201ENST00000432815 1337 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
PKNOX1P55347 Z99496.1-201ENST00000469424 1477 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PKNOX1P55347 SNORA62.3-201ENST00000365110 153 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 Y_RNA.578-201ENST00000390903 88 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PKNOX1P55347 AL031121.1-201ENST00000406553 254 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.98□□□□□ -1.93
PKNOX1P55347 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PKNOX1P55347 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.98□□□□□ -1.93
PKNOX1P55347 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.98□□□□□ -1.93
PKNOX1P55347 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.98□□□□□ -1.93
PKNOX1P55347 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PKNOX1P55347 AC079780.1-201ENST00000428259 207 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 RPL21P40-201ENST00000428586 483 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AL390023.1-201ENST00000428836 262 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AC012497.1-201ENST00000429392 575 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 RN7SL863P-201ENST00000462370 296 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.98□□□□□ -1.93
PKNOX1P55347 RN7SL633P-201ENST00000488974 297 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AC096751.1-202ENST00000502691 1067 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AC105914.1-201ENST00000511798 226 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 SNORA19.3-201ENST00000516165 130 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.98□□□□□ -1.93
PKNOX1P55347 AC118942.1-201ENST00000529674 1035 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 OR4P1P-201ENST00000530808 1136 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.98□□□□□ -1.93
PKNOX1P55347 EEF1B2P4-201ENST00000551398 348 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AL022067.1-201ENST00000602426 454 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AL109653.1-201ENST00000603091 248 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 PRELID3BP8-201ENST00000604148 295 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.98□□□□□ -1.93
PKNOX1P55347 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.98□□□□□ -1.93
PKNOX1P55347 AC009237.15-201ENST00000610252 501 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PKNOX1P55347 AL731566.2-201ENST00000618971 317 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AC099506.2-201ENST00000623074 221 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AC091925.2-201ENST00000625059 256 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 AL138960.2-201ENST00000625145 535 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 CYP3A51P-201ENST00000633513 256 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 ZNF663P-202ENST00000641770 1131 ntBASIC2.98□□□□□ -1.93
PKNOX1P55347 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
PKNOX1P55347 AC103988.1-201ENST00000566382 2177 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PKNOX1P55347 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.97□□□□□ -1.93
PKNOX1P55347 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PKNOX1P55347 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PKNOX1P55347 Y_RNA.126-201ENST00000363382 111 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 MIR181B1-201ENST00000385240 110 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 RNU1-101P-201ENST00000391171 127 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 AL355143.1-201ENST00000407101 841 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 RN7SKP123-201ENST00000410732 291 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.97□□□□□ -1.93
PKNOX1P55347 RPL7P44-201ENST00000424827 742 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 AC011242.1-201ENST00000433596 1158 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 VN1R10P-201ENST00000447106 875 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 MTND2P19-201ENST00000449129 1012 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.97□□□□□ -1.93
PKNOX1P55347 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.97□□□□□ -1.93
PKNOX1P55347 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.97□□□□□ -1.93
PKNOX1P55347 AC092757.1-201ENST00000467293 467 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.97□□□□□ -1.93
PKNOX1P55347 AC104982.1-201ENST00000478775 574 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 RPL7P23-201ENST00000493874 747 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 AC004062.1-201ENST00000509926 645 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 SAP18P1-201ENST00000512058 390 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.97□□□□□ -1.93
PKNOX1P55347 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.97□□□□□ -1.93
PKNOX1P55347 RNU6-1261P-201ENST00000517194 104 ntBASIC2.97□□□□□ -1.93
PKNOX1P55347 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.97□□□□□ -1.93
PKNOX1P55347 AP001189.2-201ENST00000527320 189 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms