Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PAICSP4-201ENST00000517543 1253 ntBASIC4.36□□□□□ -1.71
COPAP53621 DUXAP2-201ENST00000519198 589 ntBASIC4.36□□□□□ -1.71
COPAP53621 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.36□□□□□ -1.71
COPAP53621 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.36□□□□□ -1.71
COPAP53621 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.36□□□□□ -1.71
COPAP53621 AC245505.1-201ENST00000556398 224 ntBASIC4.36□□□□□ -1.71
COPAP53621 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.36□□□□□ -1.71
COPAP53621 RPL23AP97-201ENST00000568955 471 ntBASIC4.36□□□□□ -1.71
COPAP53621 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.36□□□□□ -1.71
COPAP53621 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.36□□□□□ -1.71
COPAP53621 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.36□□□□□ -1.71
COPAP53621 AL451044.1-201ENST00000604867 238 ntBASIC4.36□□□□□ -1.71
COPAP53621 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 NDUFA8P1-201ENST00000605525 367 ntBASIC4.36□□□□□ -1.71
COPAP53621 FAM27D1-201ENST00000612308 341 ntBASIC4.36□□□□□ -1.71
COPAP53621 AC087241.4-201ENST00000612441 480 ntBASIC4.36□□□□□ -1.71
COPAP53621 AL021997.2-201ENST00000615674 271 ntBASIC4.36□□□□□ -1.71
COPAP53621 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.36□□□□□ -1.71
COPAP53621 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 AL139089.1-201ENST00000620372 975 ntBASIC4.36□□□□□ -1.71
COPAP53621 AL161637.1-201ENST00000622380 412 ntBASIC4.36□□□□□ -1.71
COPAP53621 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.36□□□□□ -1.71
COPAP53621 OR5BE1P-202ENST00000641168 1176 ntBASIC4.36□□□□□ -1.71
COPAP53621 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COPAP53621 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COPAP53621 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.36□□□□□ -1.71
COPAP53621 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.36□□□□□ -1.71
COPAP53621 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.36□□□□□ -1.71
COPAP53621 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
COPAP53621 AC092447.7-201ENST00000422212 1621 ntBASIC4.35□□□□□ -1.71
COPAP53621 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COPAP53621 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
COPAP53621 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.35□□□□□ -1.71
COPAP53621 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COPAP53621 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
COPAP53621 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.35□□□□□ -1.71
COPAP53621 MIR372-201ENST00000362225 67 ntBASIC4.35□□□□□ -1.71
COPAP53621 RNY4P24-201ENST00000362735 96 ntBASIC4.35□□□□□ -1.71
COPAP53621 RNA5SP258-201ENST00000362750 119 ntBASIC4.35□□□□□ -1.71
COPAP53621 RNU1-14P-201ENST00000362759 152 ntBASIC4.35□□□□□ -1.71
COPAP53621 RNU6-97P-201ENST00000363387 104 ntBASIC4.35□□□□□ -1.71
COPAP53621 Y_RNA.234-201ENST00000364409 97 ntBASIC4.35□□□□□ -1.71
COPAP53621 SNORD6-201ENST00000365444 73 ntBASIC4.35□□□□□ -1.71
COPAP53621 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COPAP53621 RNU6-1207P-201ENST00000384343 107 ntBASIC4.35□□□□□ -1.71
COPAP53621 RNU6-1215P-201ENST00000384441 102 ntBASIC4.35□□□□□ -1.71
COPAP53621 RNU6-821P-201ENST00000390995 107 ntBASIC4.35□□□□□ -1.71
COPAP53621 RNA5SP36-201ENST00000410197 133 ntBASIC4.35□□□□□ -1.71
COPAP53621 Y_RNA.598-201ENST00000410480 95 ntBASIC4.35□□□□□ -1.71
COPAP53621 RN7SKP27-201ENST00000410684 333 ntBASIC4.35□□□□□ -1.71
COPAP53621 RNA5SP39-201ENST00000411245 120 ntBASIC4.35□□□□□ -1.71
COPAP53621 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.35□□□□□ -1.71
COPAP53621 RAC1P3-201ENST00000416129 580 ntBASIC4.35□□□□□ -1.71
COPAP53621 RPL21P112-201ENST00000434403 463 ntBASIC4.35□□□□□ -1.71
COPAP53621 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.35□□□□□ -1.71
COPAP53621 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.35□□□□□ -1.71
COPAP53621 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.35□□□□□ -1.71
COPAP53621 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.35□□□□□ -1.71
COPAP53621 TPT1P7-201ENST00000458300 517 ntBASIC4.35□□□□□ -1.71
COPAP53621 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
COPAP53621 AC068305.1-201ENST00000497406 726 ntBASIC4.35□□□□□ -1.71
COPAP53621 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.35□□□□□ -1.71
COPAP53621 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.35□□□□□ -1.71
COPAP53621 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
COPAP53621 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
COPAP53621 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COPAP53621 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.35□□□□□ -1.71
COPAP53621 RNU6-714P-201ENST00000516963 103 ntBASIC4.35□□□□□ -1.71
COPAP53621 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.35□□□□□ -1.71
COPAP53621 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.35□□□□□ -1.71
COPAP53621 OR8R1P-201ENST00000543943 764 ntBASIC4.35□□□□□ -1.71
COPAP53621 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COPAP53621 EEF1B2P4-201ENST00000551398 348 ntBASIC4.35□□□□□ -1.71
COPAP53621 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.35□□□□□ -1.71
COPAP53621 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.35□□□□□ -1.71
COPAP53621 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.35□□□□□ -1.71
COPAP53621 AC010546.1-201ENST00000569391 485 ntBASIC4.35□□□□□ -1.71
COPAP53621 MIR1254-2-201ENST00000579553 63 ntBASIC4.35□□□□□ -1.71
COPAP53621 AP001094.1-201ENST00000579805 193 ntBASIC4.35□□□□□ -1.71
COPAP53621 AC093227.2-201ENST00000589357 285 ntBASIC4.35□□□□□ -1.71
COPAP53621 BNIP3P8-201ENST00000597863 560 ntBASIC4.35□□□□□ -1.71
COPAP53621 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.35□□□□□ -1.71
COPAP53621 AL160290.3-201ENST00000604869 165 ntBASIC4.35□□□□□ -1.71
COPAP53621 AC004853.1-201ENST00000604902 698 ntBASIC4.35□□□□□ -1.71
COPAP53621 AC006566.1-201ENST00000608943 513 ntBASIC4.35□□□□□ -1.71
COPAP53621 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.35□□□□□ -1.71
COPAP53621 AC108479.2-201ENST00000617314 601 ntBASIC4.35□□□□□ -1.71
COPAP53621 AC007546.1-201ENST00000619452 559 ntBASIC4.35□□□□□ -1.71
COPAP53621 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.35□□□□□ -1.71
COPAP53621 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COPAP53621 CCT4P2-201ENST00000233836 1548 ntBASIC4.35□□□□□ -1.71
COPAP53621 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
COPAP53621 AC027514.1-201ENST00000588561 1603 ntBASIC4.35□□□□□ -1.71
COPAP53621 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
COPAP53621 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COPAP53621 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
COPAP53621 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COPAP53621 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COPAP53621 Y_RNA.3-201ENST00000362331 103 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms