Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HNF4AP41235 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HNF4AP41235 AP004289.2-201ENST00000444413 1457 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 RNU6-560P-201ENST00000364007 108 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 EI24P2-201ENST00000397776 1076 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.61□□□□□ -1.83
HNF4AP41235 RN7SKP156-201ENST00000410308 342 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 RAP1BP1-201ENST00000412709 553 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.61□□□□□ -1.83
HNF4AP41235 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HNF4AP41235 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HNF4AP41235 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.61□□□□□ -1.83
HNF4AP41235 RPL17P36-201ENST00000420302 549 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.61□□□□□ -1.83
HNF4AP41235 MRPS36P1-201ENST00000421291 307 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.61□□□□□ -1.83
HNF4AP41235 GTF2IP23-201ENST00000423746 351 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 RPL7P44-201ENST00000424827 742 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.61□□□□□ -1.83
HNF4AP41235 SKP1P1-201ENST00000438081 489 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.61□□□□□ -1.83
HNF4AP41235 AC104978.1-201ENST00000449387 391 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 RPL36AP33-201ENST00000450395 310 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HNF4AP41235 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.61□□□□□ -1.83
HNF4AP41235 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.61□□□□□ -1.83
HNF4AP41235 AC021146.8-201ENST00000507455 733 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AC010486.3-201ENST00000511602 785 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 MRPS33P3-201ENST00000513456 322 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.61□□□□□ -1.83
HNF4AP41235 SNORD59.2-201ENST00000516873 68 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.61□□□□□ -1.83
HNF4AP41235 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HNF4AP41235 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.61□□□□□ -1.83
HNF4AP41235 CR383656.7-201ENST00000548164 174 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 HSPE1P3-201ENST00000559254 309 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.61□□□□□ -1.83
HNF4AP41235 MIR3186-201ENST00000577404 85 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AC053481.3-201ENST00000577881 843 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.61□□□□□ -1.83
HNF4AP41235 Z94722.1-201ENST00000604328 474 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AL133507.1-201ENST00000605269 557 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.61□□□□□ -1.83
HNF4AP41235 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.61□□□□□ -1.83
HNF4AP41235 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HNF4AP41235 AC005344.1-201ENST00000613391 459 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HNF4AP41235 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HNF4AP41235 AC022509.4-201ENST00000621404 572 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AC092628.2-201ENST00000622492 339 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AC004009.2-201ENST00000623016 728 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 AC007490.1-201ENST00000624321 703 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.61□□□□□ -1.83
HNF4AP41235 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HNF4AP41235 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HNF4AP41235 CUL1P1-201ENST00000509510 2425 ntBASIC3.61□□□□□ -1.83
HNF4AP41235 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HNF4AP41235 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HNF4AP41235 RNU6-157P-201ENST00000383957 107 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 Y_RNA.408-201ENST00000383987 102 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 RNU6-882P-201ENST00000391025 103 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 FAT1P1-201ENST00000406588 507 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 AL450338.1-201ENST00000407987 512 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.6□□□□□ -1.83
HNF4AP41235 AC011233.1-201ENST00000422812 283 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.6□□□□□ -1.83
HNF4AP41235 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.6□□□□□ -1.83
HNF4AP41235 AC104308.1-201ENST00000454621 333 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 AC099563.1-201ENST00000456086 418 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 RNA5SP310-201ENST00000459084 116 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.6□□□□□ -1.83
HNF4AP41235 RPS4XP10-201ENST00000465034 731 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.6□□□□□ -1.83
HNF4AP41235 AC108734.3-201ENST00000481241 1165 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.6□□□□□ -1.83
HNF4AP41235 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.6□□□□□ -1.83
HNF4AP41235 AC105313.1-201ENST00000509121 353 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.6□□□□□ -1.83
HNF4AP41235 AC118465.1-201ENST00000513820 1271 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 RNU6-1225P-201ENST00000516336 65 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 AC087373.1-201ENST00000524920 491 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HNF4AP41235 AP003461.1-201ENST00000528866 78 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.6□□□□□ -1.83
HNF4AP41235 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.6□□□□□ -1.83
HNF4AP41235 AC087499.8-201ENST00000578406 226 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.6□□□□□ -1.83
HNF4AP41235 MAGOH2P-202ENST00000584384 429 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.6□□□□□ -1.83
HNF4AP41235 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.6□□□□□ -1.83
HNF4AP41235 BNIP3P26-201ENST00000600827 554 ntBASIC3.6□□□□□ -1.83
HNF4AP41235 AC009220.3-201ENST00000604318 586 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms