Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC073465.2-201ENST00000440938 498 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC12P31275 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC12P31275 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC12P31275 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC12P31275 AC008481.1-201ENST00000463278 396 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AC092754.1-201ENST00000472975 479 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AC083904.1-201ENST00000487828 231 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 SNRPCP2-201ENST00000504370 475 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
HOXC12P31275 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC12P31275 AC108078.2-201ENST00000510750 236 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AC026801.2-201ENST00000515352 425 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AC008694.2-201ENST00000517591 306 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 MYL12AP1-201ENST00000518490 515 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC12P31275 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC12P31275 AC100870.1-201ENST00000522035 505 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC12P31275 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC12P31275 AL359219.2-201ENST00000555184 348 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AL118558.2-201ENST00000556294 238 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 MIR4458-201ENST00000578872 75 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC12P31275 AL022099.1-201ENST00000604551 712 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AL022345.1-201ENST00000607292 135 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AC000068.2-201ENST00000608816 460 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AP001486.3-201ENST00000615334 372 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC12P31275 AC243312.2-201ENST00000623340 601 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AP002799.1-201ENST00000623552 423 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 AL445487.1-201ENST00000415694 1580 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 MTCO1P24-201ENST00000515438 1558 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HOXC12P31275 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC12P31275 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC12P31275 MAPK10-328ENST00000641553 4009 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC12P31275 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
HOXC12P31275 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC12P31275 AC073136.1-201ENST00000449426 2884 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AC012618.3-205ENST00000637896 1496 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC12P31275 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC12P31275 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC12P31275 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC12P31275 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC12P31275 XIAPP3-201ENST00000312918 795 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC12P31275 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC12P31275 Y_RNA.378-201ENST00000365652 113 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 RNU6-1279P-201ENST00000383917 103 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 Y_RNA.387-201ENST00000383918 102 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 MIR135A2-201ENST00000384854 100 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 MIR105-1-201ENST00000385222 81 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 SOD2P1-201ENST00000396543 562 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 RPL21P67-201ENST00000402896 478 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 FAR2P2-201ENST00000413041 594 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC12P31275 AC099677.1-201ENST00000420575 175 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 FAR2P4-202ENST00000425399 584 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AL360081.1-201ENST00000428299 555 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC12P31275 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
HOXC12P31275 PRPS1P1-201ENST00000445305 876 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AC012512.1-201ENST00000446594 718 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 RPL29P29-201ENST00000448725 423 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AL162389.1-201ENST00000449233 177 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AZGP1P2-201ENST00000454506 345 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXC12P31275 RPS18P6-201ENST00000476880 458 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC12P31275 RN7SL432P-201ENST00000484057 298 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AC007686.1-201ENST00000488511 463 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 RPL23AP55-201ENST00000498163 452 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXC12P31275 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC12P31275 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC12P31275 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC12P31275 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC12P31275 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXC12P31275 AF038458.1-201ENST00000588406 262 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC12P31275 AL139124.1-201ENST00000609123 421 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AC092807.2-201ENST00000609367 243 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 Y_RNA.812-201ENST00000610788 101 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 Y_RNA.784-201ENST00000613803 101 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 uc_338.15-201ENST00000615470 191 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 Y_RNA.787-201ENST00000616522 101 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 Y_RNA.780-201ENST00000617336 101 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 AC109583.2-201ENST00000617367 129 ntBASIC4.76□□□□□ -1.65
HOXC12P31275 Y_RNA.801-201ENST00000619005 101 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms