Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU6-835P-201ENST00000516974 104 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 CENPUP1-201ENST00000526649 1202 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.71□□□□□ -1.5
ERCC3P19447 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.71□□□□□ -1.5
ERCC3P19447 BNIP3P9-201ENST00000603714 553 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.71□□□□□ -1.5
ERCC3P19447 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
ERCC3P19447 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC3P19447 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.71□□□□□ -1.5
ERCC3P19447 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
ERCC3P19447 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.71□□□□□ -1.5
ERCC3P19447 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC3P19447 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
ERCC3P19447 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC3P19447 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.7□□□□□ -1.5
ERCC3P19447 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ERCC3P19447 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC3P19447 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC3P19447 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.7□□□□□ -1.5
ERCC3P19447 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC3P19447 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC3P19447 RNU6-606P-201ENST00000384721 111 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 RNA5SP332-201ENST00000391063 115 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 AL080315.1-201ENST00000406055 466 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 RPL21P111-201ENST00000418453 477 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 AL513185.2-201ENST00000425543 193 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.7□□□□□ -1.5
ERCC3P19447 AL359265.2-201ENST00000434367 631 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 AL121601.2-201ENST00000438019 707 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.7□□□□□ -1.5
ERCC3P19447 CACYBPP2-201ENST00000453625 678 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 RPS20P20-201ENST00000460498 340 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.7□□□□□ -1.5
ERCC3P19447 AC098976.1-201ENST00000513014 541 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 RN7SKP276-201ENST00000516242 268 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.7□□□□□ -1.5
ERCC3P19447 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.7□□□□□ -1.5
ERCC3P19447 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.7□□□□□ -1.5
ERCC3P19447 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.7□□□□□ -1.5
ERCC3P19447 AC090616.5-202ENST00000582111 297 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 MIR4293-201ENST00000584305 78 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.7□□□□□ -1.5
ERCC3P19447 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.7□□□□□ -1.5
ERCC3P19447 AL022099.1-201ENST00000604551 712 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 RNA5SP108-201ENST00000605921 117 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 AC025253.1-201ENST00000613623 543 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.7□□□□□ -1.5
ERCC3P19447 AC104260.1-201ENST00000616660 539 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 MIR6130-201ENST00000619419 109 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 AL589994.2-201ENST00000621124 579 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.7□□□□□ -1.5
ERCC3P19447 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ERCC3P19447 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC3P19447 AL445487.1-201ENST00000415694 1580 ntBASIC5.7□□□□□ -1.5
ERCC3P19447 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC3P19447 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.7□□□□□ -1.5
ERCC3P19447 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ERCC3P19447 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 AC006020.1-201ENST00000420179 1854 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 RNU6-451P-201ENST00000362921 107 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 Y_RNA.255-201ENST00000364581 97 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 RNA5SP235-201ENST00000365411 114 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 MIR454-201ENST00000390180 115 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 MIR298-201ENST00000401212 88 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 MIR1271-201ENST00000408537 86 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.69□□□□□ -1.5
ERCC3P19447 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.69□□□□□ -1.5
ERCC3P19447 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.69□□□□□ -1.5
ERCC3P19447 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.69□□□□□ -1.5
ERCC3P19447 USP9YP8-201ENST00000441913 500 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 TDGF1P1-201ENST00000445734 527 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 RNU7-182P-201ENST00000459009 62 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 SNORD108-201ENST00000459332 71 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 RPL23AP56-201ENST00000460778 453 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 AL163973.1-201ENST00000484753 577 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 PCBP2P3-201ENST00000509726 843 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 AC114781.4-201ENST00000513707 639 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 AC103843.2-201ENST00000530523 682 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.69□□□□□ -1.5
ERCC3P19447 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.69□□□□□ -1.5
ERCC3P19447 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.69□□□□□ -1.5
ERCC3P19447 TVP23CP2-201ENST00000571473 623 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 AC015917.1-201ENST00000579654 510 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 AC010591.1-201ENST00000603941 649 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.69□□□□□ -1.5
ERCC3P19447 RMST_3.1-201ENST00000611651 109 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.69□□□□□ -1.5
ERCC3P19447 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 SNHG22-203ENST00000617833 660 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC3P19447 AC055839.1-201ENST00000634467 498 ntBASIC5.69□□□□□ -1.5
ERCC3P19447 AC100810.6-201ENST00000638068 285 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms