Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 RNU6-760P-201ENST00000516078 97 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 RNU1-61P-201ENST00000516107 151 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 RNA5SP468-201ENST00000516782 93 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 SNORA31.20-201ENST00000517111 133 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC012182.1-201ENST00000570133 895 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC061975.8-201ENST00000587058 721 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC006023.1-201ENST00000603944 259 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC079610.2-201ENST00000604818 690 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC018926.3-201ENST00000618841 406 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AL136360.1-201ENST00000503377 1900 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AL049780.3-201ENST00000624612 1583 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 AC007336.1-201ENST00000576365 3828 ntBASIC2.48□□□□□ -2.01
HLA-DQB2P05538 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DQB2P05538 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DQB2P05538 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DQB2P05538 RNU6-543P-201ENST00000362576 108 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 SNORA25.6-201ENST00000364121 118 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 RNU6-374P-201ENST00000364146 108 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AL359511.1-201ENST00000402970 211 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AL591034.1-201ENST00000407447 340 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 RNA5SP56-201ENST00000410277 118 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AL158825.1-201ENST00000414735 521 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AC009963.1-201ENST00000417265 157 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AC098826.1-201ENST00000433943 471 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AC104389.3-201ENST00000445629 235 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AC092685.1-201ENST00000447960 1243 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AL035407.2-201ENST00000454090 378 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AC091917.2-201ENST00000505002 744 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-DQB2P05538 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 RPL7P20-201ENST00000520308 745 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.47□□□□□ -2.01
HLA-DQB2P05538 TRAV11-201ENST00000539512 339 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DQB2P05538 MIR3670-2-201ENST00000582974 65 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 MIR3670-1-201ENST00000584160 65 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 MIR3670-3-201ENST00000584855 65 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AL356575.1-201ENST00000603008 283 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AC103881.1-201ENST00000603476 538 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 MIR3670-4-201ENST00000612260 65 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 AL110115.1-201ENST00000614396 364 ntBASIC2.47□□□□□ -2.01
HLA-DQB2P05538 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.47□□□□□ -2.01
HLA-DQB2P05538 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-DQB2P05538 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.46□□□□□ -2.01
HLA-DQB2P05538 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.46□□□□□ -2.01
HLA-DQB2P05538 AL136520.1-201ENST00000600311 1322 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HLA-DQB2P05538 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DQB2P05538 RNU6-40P-201ENST00000384254 107 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 RPL21P75-201ENST00000396599 483 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 RPL21P28-201ENST00000401418 483 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AL356057.1-202ENST00000402263 756 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AL592114.1-201ENST00000403842 483 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQB2P05538 RPL7P10-201ENST00000417407 739 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 MTCO1P39-201ENST00000426148 480 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 MTND2P21-201ENST00000436242 1042 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AC004865.1-201ENST00000442276 1003 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 RPS26P56-201ENST00000444468 240 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AC233982.1-201ENST00000451247 436 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 HMGB1P15-201ENST00000453854 435 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DQB2P05538 RPL21P39-201ENST00000463605 483 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AC011979.1-201ENST00000472300 483 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 RPL21P93-201ENST00000480465 489 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AC233702.1-201ENST00000482905 502 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AC087190.1-201ENST00000484462 480 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 RPL36AP51-201ENST00000487216 318 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AC093591.1-201ENST00000491435 481 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQB2P05538 RPL21P16-201ENST00000495531 483 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AC098799.2-201ENST00000509466 868 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DQB2P05538 CIR1P1-201ENST00000524055 1133 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 MIR4672-201ENST00000583126 81 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 AC060766.3-201ENST00000591442 263 ntBASIC2.46□□□□□ -2.02
HLA-DQB2P05538 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DQB2P05538 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HLA-DQB2P05538 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms