Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS4BO75351 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS4BO75351 PRDX4P1-201ENST00000507189 574 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AC009646.1-201ENST00000510455 318 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 MTCO3P44-201ENST00000510977 541 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AC007016.1-201ENST00000512110 244 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS4BO75351 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS4BO75351 SNORA31.9-201ENST00000516429 84 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 IGLVIV-53-201ENST00000520107 367 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 IGLV3-26-201ENST00000520756 302 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 OR5AQ1P-201ENST00000527596 927 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS4BO75351 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS4BO75351 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS4BO75351 AC069240.1-201ENST00000548774 375 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS4BO75351 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS4BO75351 AC106785.1-201ENST00000565935 262 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 RPL23AP97-201ENST00000568955 471 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 HNRNPCP4-201ENST00000571636 900 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS4BO75351 AC006504.3-201ENST00000586818 523 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 YWHAQP7-201ENST00000603536 658 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AC025588.3-201ENST00000604182 274 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AC004067.1-201ENST00000608733 700 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AC017083.3-201ENST00000609955 700 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AL158196.1-201ENST00000616786 434 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 ZYXP1-201ENST00000617638 118 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AP005019.3-201ENST00000620418 560 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AC007546.2-201ENST00000623996 360 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AL008636.1-201ENST00000625038 1018 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VPS4BO75351 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS4BO75351 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS4BO75351 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS4BO75351 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
VPS4BO75351 ZNF734P-201ENST00000419494 1534 ntBASIC4.36□□□□□ -1.71
VPS4BO75351 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VPS4BO75351 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS4BO75351 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
VPS4BO75351 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
VPS4BO75351 CPHL1P-201ENST00000461341 3407 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 SNORA37-201ENST00000384504 129 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 MIR134-201ENST00000385258 73 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 AL590002.1-201ENST00000406554 418 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS4BO75351 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS4BO75351 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS4BO75351 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS4BO75351 AL138785.1-201ENST00000425821 331 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 MTCO3P18-201ENST00000440206 761 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS4BO75351 RPS4XP4-201ENST00000443195 763 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 AL359073.1-201ENST00000448036 403 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 AL353691.1-201ENST00000451332 387 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 AC012671.1-201ENST00000451912 203 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS4BO75351 AC104308.1-201ENST00000454621 333 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 MTCO3P20-201ENST00000454926 688 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 RPL37P6-202ENST00000464216 403 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 RPL31P58-201ENST00000469001 379 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS4BO75351 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS4BO75351 AP003072.2-201ENST00000527756 676 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS4BO75351 SETP2-201ENST00000553886 926 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS4BO75351 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.35□□□□□ -1.71
VPS4BO75351 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS4BO75351 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS4BO75351 HMGB1P33-201ENST00000563485 527 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 CYP4A43P-201ENST00000568156 121 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
VPS4BO75351 AC067959.1-201ENST00000604334 379 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 AC104458.1-201ENST00000608243 463 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 AP001596.2-201ENST00000608410 312 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VPS4BO75351 AL732618.1-201ENST00000623251 301 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 AC091953.2-201ENST00000623979 160 ntBASIC4.35□□□□□ -1.71
VPS4BO75351 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS4BO75351 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS4BO75351 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS4BO75351 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS4BO75351 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS4BO75351 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS4BO75351 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VPS4BO75351 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS4BO75351 AC009902.3-201ENST00000606235 2172 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS4BO75351 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VPS4BO75351 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS4BO75351 OR5J1P-201ENST00000313544 939 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VPS4BO75351 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS4BO75351 Y_RNA.390-201ENST00000383932 102 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 CCNG1P1-201ENST00000406783 885 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 USP9YP6-201ENST00000413550 854 ntBASIC4.34□□□□□ -1.71
VPS4BO75351 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms