Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA3O43365 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 AC087783.2-201ENST00000605070 562 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 AL139124.1-201ENST00000609123 421 ntBASIC4.17□□□□□ -1.74
HOXA3O43365 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA3O43365 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA3O43365 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA3O43365 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA3O43365 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA3O43365 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA3O43365 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HOXA3O43365 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA3O43365 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA3O43365 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HOXA3O43365 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA3O43365 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 RN7SKP145-201ENST00000363291 303 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 Y_RNA.315-201ENST00000365117 102 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 SNORA70.6-201ENST00000383934 134 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 Y_RNA.414-201ENST00000384011 101 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 Y_RNA.576-201ENST00000384781 102 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 UBE2V1P2-201ENST00000397758 440 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AL359634.1-202ENST00000404721 284 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 COX6B1P1-201ENST00000415962 213 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AL391219.1-201ENST00000422570 483 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA3O43365 ELOCP18-201ENST00000434209 337 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 PRPF38AP2-201ENST00000438179 851 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 H2AFZP6-201ENST00000444403 394 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA3O43365 AC234775.1-201ENST00000454247 670 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 AC108161.1-201ENST00000461060 402 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AP000797.2-201ENST00000475768 606 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AC007686.1-201ENST00000488511 463 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AC104806.1-201ENST00000508720 308 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 RNU6-864P-201ENST00000516256 108 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AC103783.1-201ENST00000520506 373 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AP003385.6-201ENST00000531603 374 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AC109635.4-202ENST00000531666 412 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AC020661.2-201ENST00000560114 134 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 FRG2DP-202ENST00000566967 323 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AC093249.1-201ENST00000567049 203 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HOXA3O43365 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HOXA3O43365 MIR4691-201ENST00000583764 85 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA3O43365 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 AL669831.4-202ENST00000590817 238 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 CTHRC1P1-201ENST00000605383 469 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AC092807.2-201ENST00000609367 243 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AL390240.1-201ENST00000612950 384 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA3O43365 AL672167.1-205ENST00000641112 3080 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA3O43365 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 AC100757.1-201ENST00000616872 1835 ntBASIC4.16□□□□□ -1.74
HOXA3O43365 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA3O43365 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA3O43365 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA3O43365 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXA3O43365 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
HOXA3O43365 GABPAP-201ENST00000419271 1356 ntBASIC4.15□□□□□ -1.74
HOXA3O43365 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.15□□□□□ -1.74
HOXA3O43365 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
HOXA3O43365 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXA3O43365 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.15□□□□□ -1.74
HOXA3O43365 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HOXA3O43365 EXOC5P1-201ENST00000510543 1969 ntBASIC4.15□□□□□ -1.74
HOXA3O43365 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
HOXA3O43365 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HOXA3O43365 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.15□□□□□ -1.74
HOXA3O43365 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA3O43365 RNU6-1287P-201ENST00000362914 107 ntBASIC4.15□□□□□ -1.75
HOXA3O43365 Y_RNA.132-201ENST00000363421 102 ntBASIC4.15□□□□□ -1.75
HOXA3O43365 RNU6-1284P-201ENST00000363701 100 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms