Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RPL23AP58-201ENST00000440453 469 ntBASIC2.98□□□□□ -1.93
LSM1O15116 RNA5SP310-201ENST00000459084 116 ntBASIC2.98□□□□□ -1.93
LSM1O15116 AC008571.1-201ENST00000467232 300 ntBASIC2.98□□□□□ -1.93
LSM1O15116 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.98□□□□□ -1.93
LSM1O15116 AP001025.2-201ENST00000490908 477 ntBASIC2.98□□□□□ -1.93
LSM1O15116 RPL21P131-201ENST00000497298 483 ntBASIC2.98□□□□□ -1.93
LSM1O15116 SAP18P1-201ENST00000512058 390 ntBASIC2.98□□□□□ -1.93
LSM1O15116 GMPSP1-201ENST00000514075 579 ntBASIC2.98□□□□□ -1.93
LSM1O15116 RN7SKP43-201ENST00000516173 320 ntBASIC2.98□□□□□ -1.93
LSM1O15116 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.98□□□□□ -1.93
LSM1O15116 AC006518.2-201ENST00000542513 940 ntBASIC2.98□□□□□ -1.93
LSM1O15116 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.98□□□□□ -1.93
LSM1O15116 AC011611.1-201ENST00000552179 197 ntBASIC2.98□□□□□ -1.93
LSM1O15116 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.98□□□□□ -1.93
LSM1O15116 DNAJC8P1-201ENST00000554535 372 ntBASIC2.98□□□□□ -1.93
LSM1O15116 MED28P6-201ENST00000558776 231 ntBASIC2.98□□□□□ -1.93
LSM1O15116 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.98□□□□□ -1.93
LSM1O15116 VN1R7P-201ENST00000619242 903 ntBASIC2.98□□□□□ -1.93
LSM1O15116 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.98□□□□□ -1.93
LSM1O15116 AL512506.2-201ENST00000624472 458 ntBASIC2.98□□□□□ -1.93
LSM1O15116 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.97□□□□□ -1.93
LSM1O15116 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LSM1O15116 AL513185.3-201ENST00000433335 1300 ntBASIC2.97□□□□□ -1.93
LSM1O15116 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LSM1O15116 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LSM1O15116 SNORD56.5-201ENST00000364281 72 ntBASIC2.97□□□□□ -1.93
LSM1O15116 MIR134-201ENST00000385258 73 ntBASIC2.97□□□□□ -1.93
LSM1O15116 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LSM1O15116 SNORD88.1-201ENST00000408684 91 ntBASIC2.97□□□□□ -1.93
LSM1O15116 RPF2P1-201ENST00000424137 906 ntBASIC2.97□□□□□ -1.93
LSM1O15116 AL159987.2-201ENST00000432754 307 ntBASIC2.97□□□□□ -1.93
LSM1O15116 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.97□□□□□ -1.93
LSM1O15116 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.97□□□□□ -1.93
LSM1O15116 SEPT14P24-201ENST00000447236 180 ntBASIC2.97□□□□□ -1.93
LSM1O15116 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.97□□□□□ -1.93
LSM1O15116 RPS29P12-201ENST00000460178 152 ntBASIC2.97□□□□□ -1.93
LSM1O15116 RPS27AP9-201ENST00000477681 438 ntBASIC2.97□□□□□ -1.93
LSM1O15116 RN7SL20P-201ENST00000488827 297 ntBASIC2.97□□□□□ -1.93
LSM1O15116 AC091860.1-201ENST00000505723 432 ntBASIC2.97□□□□□ -1.93
LSM1O15116 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.97□□□□□ -1.93
LSM1O15116 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.97□□□□□ -1.93
LSM1O15116 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.97□□□□□ -1.93
LSM1O15116 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.97□□□□□ -1.93
LSM1O15116 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.97□□□□□ -1.93
LSM1O15116 NCAPGP2-201ENST00000557911 754 ntBASIC2.97□□□□□ -1.93
LSM1O15116 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.97□□□□□ -1.93
LSM1O15116 ZNF971P-201ENST00000562068 1249 ntBASIC2.97□□□□□ -1.93
LSM1O15116 FAM60BP-201ENST00000578364 658 ntBASIC2.97□□□□□ -1.93
LSM1O15116 AC138761.3-201ENST00000579993 334 ntBASIC2.97□□□□□ -1.93
LSM1O15116 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.97□□□□□ -1.93
LSM1O15116 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.97□□□□□ -1.93
LSM1O15116 PRELID3BP8-201ENST00000604148 295 ntBASIC2.97□□□□□ -1.93
LSM1O15116 AC026741.1-201ENST00000605892 482 ntBASIC2.97□□□□□ -1.93
LSM1O15116 AP003122.6-201ENST00000623831 495 ntBASIC2.97□□□□□ -1.93
LSM1O15116 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
LSM1O15116 AC026634.1-201ENST00000634369 198 ntBASIC2.97□□□□□ -1.93
LSM1O15116 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LSM1O15116 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
LSM1O15116 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LSM1O15116 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
LSM1O15116 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
LSM1O15116 RNU6-354P-201ENST00000383862 107 ntBASIC2.96□□□□□ -1.94
LSM1O15116 SNORA7.4-201ENST00000384249 137 ntBASIC2.96□□□□□ -1.94
LSM1O15116 RNU6-610P-201ENST00000384264 107 ntBASIC2.96□□□□□ -1.94
LSM1O15116 MIR449B-201ENST00000384995 97 ntBASIC2.96□□□□□ -1.94
LSM1O15116 ARF4P3-201ENST00000397387 509 ntBASIC2.96□□□□□ -1.94
LSM1O15116 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.96□□□□□ -1.94
LSM1O15116 AC092634.6-201ENST00000418558 192 ntBASIC2.96□□□□□ -1.94
LSM1O15116 KRR1P1-201ENST00000419430 803 ntBASIC2.96□□□□□ -1.94
LSM1O15116 Z93242.1-201ENST00000427102 353 ntBASIC2.96□□□□□ -1.94
LSM1O15116 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.96□□□□□ -1.94
LSM1O15116 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.96□□□□□ -1.94
LSM1O15116 AC097713.2-201ENST00000430199 356 ntBASIC2.96□□□□□ -1.94
LSM1O15116 CDC27P1-201ENST00000445384 715 ntBASIC2.96□□□□□ -1.94
LSM1O15116 Z96811.1-201ENST00000445880 108 ntBASIC2.96□□□□□ -1.94
LSM1O15116 AL096829.2-201ENST00000446582 742 ntBASIC2.96□□□□□ -1.94
LSM1O15116 Z75741.1-201ENST00000446793 314 ntBASIC2.96□□□□□ -1.94
LSM1O15116 CYCSP35-201ENST00000451978 304 ntBASIC2.96□□□□□ -1.94
LSM1O15116 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.96□□□□□ -1.94
LSM1O15116 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LSM1O15116 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.96□□□□□ -1.94
LSM1O15116 AP002812.1-201ENST00000495378 474 ntBASIC2.96□□□□□ -1.94
LSM1O15116 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.96□□□□□ -1.94
LSM1O15116 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LSM1O15116 OR4P1P-201ENST00000530808 1136 ntBASIC2.96□□□□□ -1.94
LSM1O15116 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.96□□□□□ -1.94
LSM1O15116 AC125611.2-201ENST00000551907 647 ntBASIC2.96□□□□□ -1.94
LSM1O15116 AC034105.4-201ENST00000568304 277 ntBASIC2.96□□□□□ -1.94
LSM1O15116 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.96□□□□□ -1.94
LSM1O15116 AL031985.2-201ENST00000600955 480 ntBASIC2.96□□□□□ -1.94
LSM1O15116 RPAP2P1-201ENST00000603626 1168 ntBASIC2.96□□□□□ -1.94
LSM1O15116 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.96□□□□□ -1.94
LSM1O15116 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.96□□□□□ -1.94
LSM1O15116 AC138932.5-201ENST00000617759 563 ntBASIC2.96□□□□□ -1.94
LSM1O15116 MTCO1P23-201ENST00000415223 1526 ntBASIC2.96□□□□□ -1.94
LSM1O15116 GDI2P1-201ENST00000429312 1336 ntBASIC2.95□□□□□ -1.94
LSM1O15116 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.95□□□□□ -1.94
LSM1O15116 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LSM1O15116 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.95□□□□□ -1.94
LSM1O15116 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms