Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 CR848007.1-201ENST00000442354 1699 ntBASIC4.06□□□□□ -1.76
MBD3L3A6NE82 AC107068.1-201ENST00000563286 4218 ntBASIC4.06□□□□□ -1.76
MBD3L3A6NE82 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AL136372.1-201ENST00000403060 228 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 CIR1P3-201ENST00000405137 479 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 EI24P1-201ENST00000416584 867 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AC090774.1-201ENST00000435925 246 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AC079781.2-201ENST00000446424 169 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AC016696.1-201ENST00000446949 318 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 SNRPGP6-201ENST00000451124 220 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 MTND2P24-201ENST00000453434 806 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 HMGB3P30-201ENST00000457863 606 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 RPS7P7-201ENST00000463499 571 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 MTCO3P38-201ENST00000468910 766 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 KLHL2P1-201ENST00000508691 521 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 RNU2-10P-201ENST00000516375 211 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 Y_RNA.704-201ENST00000516851 102 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 OR5AQ1P-201ENST00000527596 927 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 OR4R1P-201ENST00000529879 463 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AP003034.1-201ENST00000534621 422 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 ARL2BPP2-201ENST00000550907 489 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 SNORA59B-202ENST00000578183 701 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AC007363.1-201ENST00000604736 620 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AL356321.1-201ENST00000621360 228 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 MIR3688-2-201ENST00000636963 87 ntBASIC4.05□□□□□ -1.76
MBD3L3A6NE82 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MBD3L3A6NE82 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC138915.3-201ENST00000562908 1389 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 HSPE1P11-201ENST00000339579 310 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 RNU6-511P-201ENST00000363496 107 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 RNU6-1090P-201ENST00000364065 94 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 RNU6-173P-201ENST00000364215 104 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 Y_RNA.256-201ENST00000364594 104 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 SNORA23-201ENST00000365128 182 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 Y_RNA.402-201ENST00000383972 102 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 Y_RNA.453-201ENST00000384223 109 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 MIR1-2-201ENST00000384961 85 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 HSPD1P16-201ENST00000402302 394 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 RNU2-36P-201ENST00000410361 191 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AL138799.3-201ENST00000438968 350 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 MTCO2P3-201ENST00000442543 421 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 MTCO3P45-201ENST00000443036 613 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 RPL23AP20-201ENST00000447965 421 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 RAD23BP3-201ENST00000454157 1152 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC027673.1-201ENST00000456245 405 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC022364.2-201ENST00000457963 554 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 RPL21P126-201ENST00000470049 478 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 RPL23AP2-201ENST00000471227 466 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC020890.1-201ENST00000491837 504 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC083829.1-201ENST00000503756 657 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 Y_RNA.693-201ENST00000516641 110 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 RNU6-840P-201ENST00000517275 65 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AP003072.2-201ENST00000527756 676 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 MIR4293-201ENST00000584305 78 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC006504.3-201ENST00000586818 523 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC010928.3-201ENST00000587712 541 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC025449.1-201ENST00000603896 529 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC017083.3-201ENST00000609955 700 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AL023881.1-201ENST00000621088 301 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 MIR6830-201ENST00000636015 70 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 MAPK10-349ENST00000641767 3661 ntBASIC4.04□□□□□ -1.76
MBD3L3A6NE82 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
MBD3L3A6NE82 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms