Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC103987.1-201ENST00000473394 348 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC006445.2-201ENST00000510061 472 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 XKRY-201ENST00000510392 1100 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC017037.2-201ENST00000513850 890 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC022483.1-201ENST00000514020 567 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 RN7SKP21-201ENST00000516503 220 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC090615.1-201ENST00000577519 154 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC105224.1-201ENST00000587055 421 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL390208.1-201ENST00000605885 644 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC092354.2-201ENST00000607786 514 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AL138880.2-201ENST00000616214 239 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 AC090772.4-201ENST00000623599 362 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 ZNF826P-207ENST00000622273 1910 ntBASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF103-CHMP3A0A140T963 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.28□□□□□ -1.89
RNF103-CHMP3A0A140T963 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 MFSD8-233ENST00000641482 4860 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 SNORD56.3-201ENST00000363507 71 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 RNA5SP515-201ENST00000364570 118 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 RNU1-64P-201ENST00000365443 163 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 HMGB1P17-201ENST00000403495 628 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AL592310.1-201ENST00000414330 671 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC092573.2-201ENST00000434546 243 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 ISCA1P2-201ENST00000438679 421 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 NOTCH2P1-201ENST00000443481 624 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 RPL18AP17-201ENST00000455326 198 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC034236.1-201ENST00000469891 373 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AP002884.2-201ENST00000471647 395 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC091163.3-201ENST00000518269 1144 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC239860.2-201ENST00000525886 270 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 MIR4697-201ENST00000582977 78 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC006116.10-201ENST00000591836 581 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 MIR6810-201ENST00000622701 70 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AP003122.6-201ENST00000623831 495 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC005539.1-201ENST00000443768 1479 ntBASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF103-CHMP3A0A140T963 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AL079305.1-201ENST00000623159 3008 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 RPL23AP57-201ENST00000332361 466 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 MIR148B-201ENST00000362252 99 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 RN7SKP280-201ENST00000364196 304 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 SNORD116-12-201ENST00000384468 92 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 RNU6-1197P-201ENST00000391183 107 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AL356968.1-201ENST00000416622 474 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AL139421.1-201ENST00000423010 169 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 NIPA2P1-201ENST00000426223 976 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 DPPA2P1-201ENST00000428060 556 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 RPL26P6-201ENST00000440913 438 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 RPL23AP76-201ENST00000441860 458 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC007967.1-201ENST00000455422 1159 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 SNORD105B-201ENST00000458770 79 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC020898.1-201ENST00000474167 787 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 RPL7P23-201ENST00000493874 747 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC096571.1-202ENST00000506634 735 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC093677.1-201ENST00000514414 678 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AP000867.2-201ENST00000532468 320 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 DNAJC8P1-201ENST00000554535 372 ntBASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF103-CHMP3A0A140T963 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms