Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RNA5SP295-201ENST00000362655 121 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RNA5SP258-201ENST00000362750 119 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RNU5B-1-201ENST00000363286 116 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RNU6-468P-201ENST00000384003 109 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RNU6-761P-201ENST00000384148 107 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 MIR128-1-201ENST00000384921 82 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 MT-TC-201ENST00000387405 66 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AL138827.1-201ENST00000402666 306 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RPL5P18-201ENST00000406671 891 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC096632.1-201ENST00000427395 310 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC006548.1-201ENST00000427470 102 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AL139132.1-201ENST00000431587 344 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC005345.1-201ENST00000431868 217 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 SETP8-201ENST00000435341 628 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 snoU13.24-201ENST00000458998 104 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 S100A11P2-201ENST00000467589 312 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 VN1R17P-201ENST00000472048 1090 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RPS26P21-201ENST00000475397 348 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC006483.1-201ENST00000487308 313 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC093801.2-201ENST00000503966 1050 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 NAMPTP2-201ENST00000505629 1115 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 MTCO3P27-201ENST00000514397 196 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RNA5SP367-201ENST00000516557 118 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 SNORA31.20-201ENST00000517111 133 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RNU6-1073P-201ENST00000517182 106 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AP001207.1-201ENST00000524051 481 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 OR8K4P-201ENST00000534608 872 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 ELOCP31-201ENST00000540463 467 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AL136520.1-202ENST00000555494 763 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC023825.1-201ENST00000566704 1030 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC074051.3-201ENST00000570238 358 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 BNIP3P22-201ENST00000593399 556 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC002487.1-201ENST00000604565 994 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC069234.5-201ENST00000611056 416 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC078880.5-201ENST00000617845 421 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 CR381572.1-201ENST00000625098 102 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AP001002.2-201ENST00000625137 386 ntBASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
TRGV4A0A0C4DH28 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 SNORA70.4-201ENST00000365509 134 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 U8.9-201ENST00000365667 134 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 SNORA18.3-201ENST00000384122 132 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 SNORA44-201ENST00000384584 132 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 MIR217-201ENST00000384817 110 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 MIR181B1-201ENST00000385240 110 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 EIF5P1-201ENST00000400019 1231 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 MTND4LP20-201ENST00000402379 270 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 SNORA11.1-201ENST00000408133 129 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 AL136133.1-201ENST00000413694 376 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 RAC1P8-201ENST00000427086 527 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 UBE2V1P6-201ENST00000430840 422 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 RPS7P2-201ENST00000435134 607 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 MUPP-201ENST00000438111 566 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 HIGD1AP11-201ENST00000438361 280 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 AC093156.1-201ENST00000440382 670 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 CYCSP32-201ENST00000440548 321 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 SEPT14P24-201ENST00000447236 180 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 RPL36AP33-201ENST00000450395 310 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 NPM1P13-201ENST00000452663 865 ntBASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.92□□□□□ -2.1
TRGV4A0A0C4DH28 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms