Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 AL121603.1-201ENST00000553815 142 ntBASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 AADACP1-206ENST00000561502 1193 ntBASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 AC087481.2-201ENST00000565492 330 ntBASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 MIR3200-201ENST00000580767 85 ntBASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 COX6CP3-201ENST00000580869 223 ntBASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 AP001542.1-201ENST00000591314 200 ntBASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 DUXAP3-201ENST00000603616 594 ntBASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 DPRXP5-201ENST00000604662 539 ntBASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 AL162233.1-201ENST00000620014 944 ntBASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 AC026422.1-201ENST00000623961 452 ntBASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.75□□□□□ -1.97
USH1CQ9Y6N9 MIR6073-201ENST00000352083 89 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 RNU6-989P-201ENST00000362756 107 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 RNU6-1249P-201ENST00000363237 111 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 SNORA71.1-201ENST00000364523 117 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 RNU1-109P-201ENST00000383960 147 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 RNU6-441P-201ENST00000384545 106 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 RPS20P25-201ENST00000412447 352 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 USP9YP36-201ENST00000424581 829 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC091390.3-201ENST00000426478 338 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC096632.1-201ENST00000427395 310 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 RPL27AP5-201ENST00000469428 449 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC008885.1-201ENST00000514930 301 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 OR7K1P-201ENST00000546439 926 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 GTF2IP8-201ENST00000560687 584 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC233266.2-201ENST00000567067 528 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 ATP5F1P7-201ENST00000567330 760 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 ZNF861P-201ENST00000588126 639 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC092474.3-201ENST00000603022 568 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC128687.1-201ENST00000605304 619 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 BNIP3P19-201ENST00000605397 577 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC021851.1-201ENST00000608537 1082 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC090116.1-201ENST00000615679 446 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 MIR1264-201ENST00000616374 69 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC073569.3-201ENST00000619055 682 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AC092650.2-201ENST00000619984 902 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AP001002.2-201ENST00000625137 386 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 MIR3651-201ENST00000630427 90 ntBASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
USH1CQ9Y6N9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 MTND5P11-201ENST00000511037 1812 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 GSTA8P-201ENST00000404253 637 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AC006548.1-201ENST00000427470 102 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 MTATP6P4-201ENST00000427725 675 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 MTND4LP7-201ENST00000431728 294 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AL034418.1-201ENST00000448675 860 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 BX248409.1-201ENST00000455497 255 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 MTCYBP37-201ENST00000510642 1133 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AC105914.1-201ENST00000511798 226 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 RN7SKP57-201ENST00000517248 293 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 HIGD1AP6-201ENST00000521833 279 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AC022069.1-201ENST00000582910 658 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 DUXAP4-201ENST00000603046 613 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 MIR7112-201ENST00000616126 65 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AC095031.1-201ENST00000623685 672 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AC097372.4-201ENST00000625025 466 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 CR381572.1-201ENST00000625098 102 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AL121594.5-201ENST00000631724 573 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 ZNF807-201ENST00000328088 1707 ntBASIC2.73□□□□□ -1.97
USH1CQ9Y6N9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms